Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.07■□□□□ 0.16
COPB2P35606 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.07■□□□□ 0.16
COPB2P35606 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 AC108734.2-201ENST00000420887 1069 ntBASIC16.07■□□□□ 0.16
COPB2P35606 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.07■□□□□ 0.16
COPB2P35606 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.07■□□□□ 0.16
COPB2P35606 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.07■□□□□ 0.16
COPB2P35606 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.07■□□□□ 0.16
COPB2P35606 AC010234.1-201ENST00000494599 870 ntBASIC16.07■□□□□ 0.16
COPB2P35606 AC100858.1-201ENST00000514059 1228 ntBASIC16.07■□□□□ 0.16
COPB2P35606 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 CES1P2-201ENST00000566467 1242 ntBASIC16.07■□□□□ 0.16
COPB2P35606 TRMT112P3-201ENST00000580149 358 ntBASIC16.07■□□□□ 0.16
COPB2P35606 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 OR2I1P-210ENST00000642037 4691 ntBASIC16.07■□□□□ 0.16
COPB2P35606 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COPB2P35606 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COPB2P35606 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COPB2P35606 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
COPB2P35606 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.06■□□□□ 0.16
COPB2P35606 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 AC027601.5-201ENST00000624065 2482 ntBASIC16.06■□□□□ 0.16
COPB2P35606 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
COPB2P35606 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.06■□□□□ 0.16
COPB2P35606 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COPB2P35606 TUBB8P4-201ENST00000511806 1324 ntBASIC16.06■□□□□ 0.16
COPB2P35606 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.06■□□□□ 0.16
COPB2P35606 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 ACTBP14-201ENST00000411655 1089 ntBASIC16.06■□□□□ 0.16
COPB2P35606 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.06■□□□□ 0.16
COPB2P35606 RPL3P2-204ENST00000413027 1203 ntBASIC16.06■□□□□ 0.16
COPB2P35606 PGAM1P12-201ENST00000505622 748 ntBASIC16.06■□□□□ 0.16
COPB2P35606 EEF1GP8-201ENST00000506566 1154 ntBASIC16.06■□□□□ 0.16
COPB2P35606 AC090136.2-201ENST00000517809 420 ntBASIC16.06■□□□□ 0.16
COPB2P35606 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.06■□□□□ 0.16
COPB2P35606 AC055811.3-201ENST00000584952 686 ntBASIC16.06■□□□□ 0.16
COPB2P35606 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.06■□□□□ 0.16
COPB2P35606 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.06■□□□□ 0.16
COPB2P35606 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.06■□□□□ 0.16
COPB2P35606 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COPB2P35606 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
COPB2P35606 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COPB2P35606 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COPB2P35606 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.06■□□□□ 0.16
COPB2P35606 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.06■□□□□ 0.16
COPB2P35606 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COPB2P35606 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms