Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 KRT8P21-201ENST00000430398 1491 ntBASIC13.14□□□□□ -0.31
LCN1P31025 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
LCN1P31025 CICP16-201ENST00000502609 2813 ntBASIC13.14□□□□□ -0.31
LCN1P31025 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.14□□□□□ -0.31
LCN1P31025 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LCN1P31025 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LCN1P31025 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.14□□□□□ -0.31
LCN1P31025 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LCN1P31025 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCN1P31025 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
LCN1P31025 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 AC015909.5-201ENST00000624336 2266 ntBASIC13.13□□□□□ -0.31
LCN1P31025 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 CHCHD2P2-201ENST00000503744 321 ntBASIC13.13□□□□□ -0.31
LCN1P31025 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.13□□□□□ -0.31
LCN1P31025 AC020914.3-201ENST00000594712 304 ntBASIC13.13□□□□□ -0.31
LCN1P31025 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.13□□□□□ -0.31
LCN1P31025 AC026740.1-201ENST00000607068 791 ntBASIC13.13□□□□□ -0.31
LCN1P31025 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 AC244452.3-201ENST00000636814 210 ntBASIC13.13□□□□□ -0.31
LCN1P31025 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCN1P31025 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
LCN1P31025 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.13□□□□□ -0.31
LCN1P31025 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 AC061965.1-201ENST00000560524 1465 ntBASIC13.12□□□□□ -0.31
LCN1P31025 AC138028.6-201ENST00000616106 1482 ntBASIC13.12□□□□□ -0.31
LCN1P31025 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.12□□□□□ -0.31
LCN1P31025 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCN1P31025 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms