Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL4P13236 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL4P13236 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL4P13236 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL4P13236 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL4P13236 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 GEMIN8P4-201ENST00000380526 729 ntBASIC13.18□□□□□ -0.3
CCL4P13236 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.18□□□□□ -0.3
CCL4P13236 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 GULOP-201ENST00000454030 748 ntBASIC13.18□□□□□ -0.3
CCL4P13236 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 AC087203.1-201ENST00000532111 1181 ntBASIC13.18□□□□□ -0.3
CCL4P13236 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL4P13236 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.18□□□□□ -0.3
CCL4P13236 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.18□□□□□ -0.3
CCL4P13236 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL4P13236 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CCL4P13236 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 AC005274.1-201ENST00000623460 802 ntBASIC13.18□□□□□ -0.3
CCL4P13236 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL4P13236 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL4P13236 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL4P13236 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL4P13236 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL4P13236 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL4P13236 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL4P13236 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL4P13236 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL4P13236 AC020910.6-201ENST00000623084 1459 ntBASIC13.17□□□□□ -0.3
CCL4P13236 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL4P13236 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL4P13236 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms