Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 AC064801.2-201ENST00000625052 1303 ntBASIC11.25□□□□□ -0.61
APOC3P02656 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 AC092902.5-201ENST00000641650 3256 ntBASIC11.25□□□□□ -0.61
APOC3P02656 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 PCDHA4-204ENST00000618834 10557 ntBASIC11.25□□□□□ -0.61
APOC3P02656 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 AC025183.3-201ENST00000623526 1482 ntBASIC11.25□□□□□ -0.61
APOC3P02656 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
APOC3P02656 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 AC020763.3-201ENST00000625095 2904 ntBASIC11.24□□□□□ -0.61
APOC3P02656 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 ANKRD20A7P-201ENST00000402318 2414 ntBASIC11.24□□□□□ -0.61
APOC3P02656 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC3P02656 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
APOC3P02656 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 PMS2P2-201ENST00000425039 1128 ntBASIC11.24□□□□□ -0.61
APOC3P02656 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.24□□□□□ -0.61
APOC3P02656 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.24□□□□□ -0.61
APOC3P02656 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.24□□□□□ -0.61
APOC3P02656 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC3P02656 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.24□□□□□ -0.61
APOC3P02656 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 AC011511.5-201ENST00000589379 3219 ntBASIC11.24□□□□□ -0.61
APOC3P02656 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC3P02656 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC3P02656 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
APOC3P02656 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 FOXO1B-201ENST00000504678 1527 ntBASIC11.24□□□□□ -0.61
APOC3P02656 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
APOC3P02656 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC11.24□□□□□ -0.61
APOC3P02656 CTAGE7P-201ENST00000435712 2436 ntBASIC11.24□□□□□ -0.61
APOC3P02656 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC3P02656 ZSCAN30-202ENST00000420878 4323 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
APOC3P02656 PIK3R5-218ENST00000611902 4339 ntTSL 5 BASIC11.23□□□□□ -0.61
APOC3P02656 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC3P02656 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.23□□□□□ -0.61
APOC3P02656 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
APOC3P02656 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.23□□□□□ -0.61
APOC3P02656 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
APOC3P02656 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.23□□□□□ -0.61
APOC3P02656 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC11.23□□□□□ -0.61
APOC3P02656 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC3P02656 CICP7-201ENST00000432723 2477 ntBASIC11.23□□□□□ -0.61
APOC3P02656 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.23□□□□□ -0.61
APOC3P02656 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC3P02656 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
APOC3P02656 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms