RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
SCN5A-202ENST00000333535 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
SCN5A-202ENST00000333535 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
SCN5A-202ENST00000333535 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
SCN5A-202ENST00000333535 APLP2Q06481 763 aa18.35■□□□□ 0.53
SCN5A-202ENST00000333535 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
SCN5A-202ENST00000333535 CCER1Q8TC90 406 aaPredicted RBP18.21■□□□□ 0.51
SCN5A-202ENST00000333535 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
SCN5A-202ENST00000333535 MYT1Q01538 1121 aa18.17■□□□□ 0.5
SCN5A-202ENST00000333535 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
SCN5A-202ENST00000333535 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
SCN5A-202ENST00000333535 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
SCN5A-202ENST00000333535 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
SCN5A-202ENST00000333535 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
SCN5A-202ENST00000333535 NEFLP07196 543 aa17.69■□□□□ 0.42
SCN5A-202ENST00000333535 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
SCN5A-202ENST00000333535 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
SCN5A-202ENST00000333535 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
SCN5A-202ENST00000333535 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
SCN5A-202ENST00000333535 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
SCN5A-202ENST00000333535 DAXXQ9UER7 740 aaPredicted RBP17.32■□□□□ 0.36
SCN5A-202ENST00000333535 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.36
SCN5A-202ENST00000333535 TRIM26Q12899 539 aaPredicted RBP17.17■□□□□ 0.34
SCN5A-202ENST00000333535 HRCP23327 699 aa16.91■□□□□ 0.3
SCN5A-202ENST00000333535 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
SCN5A-202ENST00000333535 MYT1LQ9UL68 1186 aa16.88■□□□□ 0.29
SCN5A-202ENST00000333535 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
SCN5A-202ENST00000333535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
SCN5A-202ENST00000333535 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
SCN5A-202ENST00000333535 POLR3GLQ9BT43 218 aa16.73■□□□□ 0.27
SCN5A-202ENST00000333535 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
SCN5A-202ENST00000333535 ITGAEP38570 1179 aa16.66■□□□□ 0.26
SCN5A-202ENST00000333535 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
SCN5A-202ENST00000333535 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
SCN5A-202ENST00000333535 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
SCN5A-202ENST00000333535 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
SCN5A-202ENST00000333535 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
SCN5A-202ENST00000333535 ANP32CO43423 234 aa16.41■□□□□ 0.22
SCN5A-202ENST00000333535 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
SCN5A-202ENST00000333535 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
SCN5A-202ENST00000333535 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
SCN5A-202ENST00000333535 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
SCN5A-202ENST00000333535 TRIM52Q96A61 297 aa16.31■□□□□ 0.2
SCN5A-202ENST00000333535 ANP32AP39687 249 aaKnown RBP16.29■□□□□ 0.2
SCN5A-202ENST00000333535 NEFMP07197 916 aa16.29■□□□□ 0.2
SCN5A-202ENST00000333535 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
SCN5A-202ENST00000333535 ANP32BQ92688 251 aaKnown RBP16.24■□□□□ 0.19
SCN5A-202ENST00000333535 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
SCN5A-202ENST00000333535 GLIPR1L2Q4G1C9 344 aa16.18■□□□□ 0.18
SCN5A-202ENST00000333535 NEUROD1Q13562 356 aa16.17■□□□□ 0.18
SCN5A-202ENST00000333535 BCANQ96GW7 911 aa16.09■□□□□ 0.17
SCN5A-202ENST00000333535 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
SCN5A-202ENST00000333535 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
SCN5A-202ENST00000333535 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
SCN5A-202ENST00000333535 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
SCN5A-202ENST00000333535 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
SCN5A-202ENST00000333535 ABCC9O60706 1549 aa16.03■□□□□ 0.16
SCN5A-202ENST00000333535 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
SCN5A-202ENST00000333535 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
SCN5A-202ENST00000333535 FBLN2P98095 1184 aa15.92■□□□□ 0.14
SCN5A-202ENST00000333535 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
SCN5A-202ENST00000333535 EIF5BO60841 1220 aaKnown RBP15.89■□□□□ 0.13
SCN5A-202ENST00000333535 ESF1Q9H501 851 aaKnown RBP15.89■□□□□ 0.13
SCN5A-202ENST00000333535 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
SCN5A-202ENST00000333535 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.85■□□□□ 0.13
SCN5A-202ENST00000333535 NPM2Q86SE8 214 aaKnown RBP15.85■□□□□ 0.13
SCN5A-202ENST00000333535 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCN5A-202ENST00000333535 BCL11AQ9H165 835 aa15.81■□□□□ 0.12
SCN5A-202ENST00000333535 FKBP8Q14318 412 aa15.79■□□□□ 0.12
SCN5A-202ENST00000333535 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
SCN5A-202ENST00000333535 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
SCN5A-202ENST00000333535 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCN5A-202ENST00000333535 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
SCN5A-202ENST00000333535 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
SCN5A-202ENST00000333535 ZNF777Q9ULD5 760 aaPredicted RBP15.71■□□□□ 0.11
SCN5A-202ENST00000333535 DDRGK1Q96HY6 314 aa15.7■□□□□ 0.1
SCN5A-202ENST00000333535 TMC1Q8TDI8 760 aa15.69■□□□□ 0.1
SCN5A-202ENST00000333535 BECN1Q14457 450 aa15.67■□□□□ 0.1
SCN5A-202ENST00000333535 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCN5A-202ENST00000333535 MYH16Q9H6N6 1097 aa15.66■□□□□ 0.1
SCN5A-202ENST00000333535 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
SCN5A-202ENST00000333535 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCN5A-202ENST00000333535 CDK11BP21127 795 aaKnown RBP15.63■□□□□ 0.09
SCN5A-202ENST00000333535 TNNT2P45379 298 aaPredicted RBP15.63■□□□□ 0.09
SCN5A-202ENST00000333535 TRIM44Q96DX7 344 aaPredicted RBP15.61■□□□□ 0.09
SCN5A-202ENST00000333535 NBR1Q14596 966 aa15.61■□□□□ 0.09
SCN5A-202ENST00000333535 FAM9BQ8IZU0 186 aa15.6■□□□□ 0.09
SCN5A-202ENST00000333535 GOLGA6L22H0YM25 854 aa15.59■□□□□ 0.09
SCN5A-202ENST00000333535 CHGAP10645 457 aaKnown RBP15.57■□□□□ 0.08
SCN5A-202ENST00000333535 NCLP19338 710 aaKnown RBP15.56■□□□□ 0.08
SCN5A-202ENST00000333535 RB1CC1Q8TDY2 1594 aa15.56■□□□□ 0.08
SCN5A-202ENST00000333535 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
SCN5A-202ENST00000333535 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
SCN5A-202ENST00000333535 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
SCN5A-202ENST00000333535 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
SCN5A-202ENST00000333535 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
SCN5A-202ENST00000333535 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
SCN5A-202ENST00000333535 RSF1Q96T23 1441 aaPredicted RBP15.49■□□□□ 0.07
SCN5A-202ENST00000333535 MRS2Q9HD23 443 aa15.48■□□□□ 0.07
SCN5A-202ENST00000333535 CASC1Q6TDU7 716 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms