RNA–Protein interactions for RNA: ENST00000231137.5

PCDHB7-201, Transcript of protocadherin beta 7, humanhuman

APPRIS P1 BASIC

Gene PCDHB7, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7-201ENST00000231137 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
PCDHB7-201ENST00000231137 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
PCDHB7-201ENST00000231137 SHROOM4Q9ULL8 1493 aa23.18■■□□□ 1.3
PCDHB7-201ENST00000231137 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
PCDHB7-201ENST00000231137 ABCC9O60706 1549 aa22.55■■□□□ 1.2
PCDHB7-201ENST00000231137 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
PCDHB7-201ENST00000231137 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
PCDHB7-201ENST00000231137 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
PCDHB7-201ENST00000231137 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
PCDHB7-201ENST00000231137 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
PCDHB7-201ENST00000231137 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
PCDHB7-201ENST00000231137 RB1CC1Q8TDY2 1594 aa21.34■■□□□ 1.01
PCDHB7-201ENST00000231137 NACADO15069 1562 aa21.33■■□□□ 1.01
PCDHB7-201ENST00000231137 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
PCDHB7-201ENST00000231137 FAM9AQ8IZU1 332 aaPredicted RBP21.24■□□□□ 0.99
PCDHB7-201ENST00000231137 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
PCDHB7-201ENST00000231137 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
PCDHB7-201ENST00000231137 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
PCDHB7-201ENST00000231137 PCGF6Q9BYE7 350 aa20.92■□□□□ 0.94
PCDHB7-201ENST00000231137 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
PCDHB7-201ENST00000231137 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
PCDHB7-201ENST00000231137 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.88
PCDHB7-201ENST00000231137 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
PCDHB7-201ENST00000231137 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
PCDHB7-201ENST00000231137 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
PCDHB7-201ENST00000231137 RANGAP1P46060 587 aaPredicted RBP20.4■□□□□ 0.86
PCDHB7-201ENST00000231137 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
PCDHB7-201ENST00000231137 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
PCDHB7-201ENST00000231137 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
PCDHB7-201ENST00000231137 HRCP23327 699 aa20.24■□□□□ 0.83
PCDHB7-201ENST00000231137 WIZO95785 1651 aa20.23■□□□□ 0.83
PCDHB7-201ENST00000231137 TRIM26Q12899 539 aaPredicted RBP20.23■□□□□ 0.83
PCDHB7-201ENST00000231137 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
PCDHB7-201ENST00000231137 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
PCDHB7-201ENST00000231137 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
PCDHB7-201ENST00000231137 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
PCDHB7-201ENST00000231137 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
PCDHB7-201ENST00000231137 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
PCDHB7-201ENST00000231137 APLP2Q06481 763 aa19.93■□□□□ 0.78
PCDHB7-201ENST00000231137 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
PCDHB7-201ENST00000231137 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
PCDHB7-201ENST00000231137 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
PCDHB7-201ENST00000231137 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
PCDHB7-201ENST00000231137 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
PCDHB7-201ENST00000231137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
PCDHB7-201ENST00000231137 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
PCDHB7-201ENST00000231137 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
PCDHB7-201ENST00000231137 SOGA1O94964 1423 aa19.78■□□□□ 0.76
PCDHB7-201ENST00000231137 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
PCDHB7-201ENST00000231137 ATP1B4Q9UN42 357 aaPredicted RBP19.7■□□□□ 0.74
PCDHB7-201ENST00000231137 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
PCDHB7-201ENST00000231137 ZEB1P37275 1124 aaPredicted RBP19.68■□□□□ 0.74
PCDHB7-201ENST00000231137 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
PCDHB7-201ENST00000231137 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
PCDHB7-201ENST00000231137 FBLN2P98095 1184 aa19.6■□□□□ 0.73
PCDHB7-201ENST00000231137 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
PCDHB7-201ENST00000231137 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
PCDHB7-201ENST00000231137 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
PCDHB7-201ENST00000231137 ITGAEP38570 1179 aa19.52■□□□□ 0.72
PCDHB7-201ENST00000231137 NESP48681 1621 aa19.51■□□□□ 0.71
PCDHB7-201ENST00000231137 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
PCDHB7-201ENST00000231137 PDS5BQ9NTI5 1447 aa19.48■□□□□ 0.71
PCDHB7-201ENST00000231137 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
PCDHB7-201ENST00000231137 FANCD2Q9BXW9 1451 aa19.43■□□□□ 0.7
PCDHB7-201ENST00000231137 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
PCDHB7-201ENST00000231137 GOLGA3Q08378 1498 aa19.4■□□□□ 0.7
PCDHB7-201ENST00000231137 EEA1Q15075 1411 aa19.39■□□□□ 0.7
PCDHB7-201ENST00000231137 CFTRP13569 1480 aa19.38■□□□□ 0.69
PCDHB7-201ENST00000231137 CLIP1P30622 1438 aa19.38■□□□□ 0.69
PCDHB7-201ENST00000231137 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
PCDHB7-201ENST00000231137 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
PCDHB7-201ENST00000231137 CUX2O14529 1486 aa19.3■□□□□ 0.68
PCDHB7-201ENST00000231137 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
PCDHB7-201ENST00000231137 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
PCDHB7-201ENST00000231137 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
PCDHB7-201ENST00000231137 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
PCDHB7-201ENST00000231137 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
PCDHB7-201ENST00000231137 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
PCDHB7-201ENST00000231137 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
PCDHB7-201ENST00000231137 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
PCDHB7-201ENST00000231137 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
PCDHB7-201ENST00000231137 YTHDC1Q96MU7 727 aaKnown RBP19.09■□□□□ 0.65
PCDHB7-201ENST00000231137 CUX1P39880 1505 aa19.09■□□□□ 0.65
PCDHB7-201ENST00000231137 DIEXFQ68CQ4 756 aaKnown RBP19.07■□□□□ 0.64
PCDHB7-201ENST00000231137 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
PCDHB7-201ENST00000231137 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
PCDHB7-201ENST00000231137 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
PCDHB7-201ENST00000231137 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
PCDHB7-201ENST00000231137 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
PCDHB7-201ENST00000231137 POLA1P09884 1462 aaPredicted RBP18.97■□□□□ 0.63
PCDHB7-201ENST00000231137 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
PCDHB7-201ENST00000231137 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
PCDHB7-201ENST00000231137 IGF1RP08069 1367 aa18.96■□□□□ 0.63
PCDHB7-201ENST00000231137 URB2Q14146 1524 aaKnown RBP18.92■□□□□ 0.62
PCDHB7-201ENST00000231137 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
PCDHB7-201ENST00000231137 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
PCDHB7-201ENST00000231137 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
PCDHB7-201ENST00000231137 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
PCDHB7-201ENST00000231137 KIF21BO75037 1637 aa18.82■□□□□ 0.6
PCDHB7-201ENST00000231137 CENPBP07199 599 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms