Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI2Q9Y5P3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AL139158.3-201ENST00000641212 1562 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC041040.2-201ENST00000622926 2899 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC019193.1-201ENST00000506678 823 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC005740.1-201ENST00000515639 522 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC242376.1-201ENST00000559033 726 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC012044.1-201ENST00000603431 297 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC087045.2-201ENST00000606279 1003 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AP001527.2-201ENST00000614441 631 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC103691.2-201ENST00000618824 433 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC068760.1-201ENST00000493579 1953 ntBASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI2Q9Y5P3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 AC092053.3-201ENST00000641308 4975 ntBASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 AC026316.1-201ENST00000398900 414 ntBASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 RPSAP31-201ENST00000416648 895 ntBASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 AC073869.2-201ENST00000417338 1026 ntBASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 AP001065.2-201ENST00000617205 644 ntBASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.29□□□□□ -0.12
RAI2Q9Y5P3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms