Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
LINC00474Q9P2X8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AC145098.2-201ENST00000623593 3026 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AL008707.1-201ENST00000422498 534 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AC100850.1-201ENST00000506768 649 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 ACR-203ENST00000529621 708 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 RN7SL163P-201ENST00000583100 276 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AC009955.4-201ENST00000597192 544 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AL008721.1-201ENST00000609964 604 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AL591471.1-201ENST00000621855 229 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AL358933.1-201ENST00000565046 2830 ntBASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LINC00474Q9P2X8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
LINC00474Q9P2X8 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
LINC00474Q9P2X8 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
LINC00474Q9P2X8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.92
LINC00474Q9P2X8 AL008718.2-201ENST00000609206 1313 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC064801.2-201ENST00000625052 1303 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC090505.1-201ENST00000430515 1834 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms