Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ISCA2P1-201ENST00000425548 448 ntBASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 AC104784.1-201ENST00000473096 294 ntBASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 AC093752.3-201ENST00000567343 901 ntBASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 BAP1-211ENST00000615113 489 ntBASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 AP003419.4-201ENST00000616071 517 ntBASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AGAP10P-201ENST00000454844 2418 ntBASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 LINC01815-202ENST00000641468 1409 ntBASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AC008132.1-202ENST00000342005 1389 ntBASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AC239868.1-201ENST00000369385 493 ntBASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AC007274.2-201ENST00000421675 662 ntBASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 RN7SL530P-201ENST00000485097 298 ntBASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 IQSEC3P1-201ENST00000538799 536 ntBASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CUEDC1Q9NWM3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms