Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDK7P50613 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.52■□□□□ 0.08
CDK7P50613 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.52■□□□□ 0.08
CDK7P50613 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 AC005252.3-201ENST00000623855 2258 ntBASIC15.52■□□□□ 0.08
CDK7P50613 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.52■□□□□ 0.08
CDK7P50613 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.52■□□□□ 0.08
CDK7P50613 AC079781.5-202ENST00000641784 3743 ntBASIC15.52■□□□□ 0.08
CDK7P50613 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 AL161772.1-201ENST00000610494 4412 ntBASIC15.52■□□□□ 0.08
CDK7P50613 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDK7P50613 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDK7P50613 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDK7P50613 LINP1-201ENST00000417112 917 ntTSL 2 BASIC15.52■□□□□ 0.08
CDK7P50613 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.52■□□□□ 0.08
CDK7P50613 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.52■□□□□ 0.08
CDK7P50613 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.52■□□□□ 0.08
CDK7P50613 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.52■□□□□ 0.08
CDK7P50613 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
CDK7P50613 AC092903.1-201ENST00000466506 262 ntBASIC15.52■□□□□ 0.08
CDK7P50613 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.52■□□□□ 0.08
CDK7P50613 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.52■□□□□ 0.08
CDK7P50613 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.52■□□□□ 0.08
CDK7P50613 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.52■□□□□ 0.08
CDK7P50613 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.52■□□□□ 0.08
CDK7P50613 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.52■□□□□ 0.08
CDK7P50613 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDK7P50613 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDK7P50613 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 MIR600HG-201ENST00000449175 5984 ntBASIC15.52■□□□□ 0.07
CDK7P50613 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDK7P50613 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDK7P50613 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.52■□□□□ 0.07
CDK7P50613 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDK7P50613 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.51■□□□□ 0.07
CDK7P50613 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDK7P50613 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDK7P50613 PGAM1P11-201ENST00000416729 680 ntBASIC15.51■□□□□ 0.07
CDK7P50613 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.51■□□□□ 0.07
CDK7P50613 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC15.51■□□□□ 0.07
CDK7P50613 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDK7P50613 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.51■□□□□ 0.07
CDK7P50613 GOLGA2P8-201ENST00000505201 779 ntBASIC15.51■□□□□ 0.07
CDK7P50613 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.51■□□□□ 0.07
CDK7P50613 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.51■□□□□ 0.07
CDK7P50613 IGHEP2-201ENST00000519308 1256 ntBASIC15.51■□□□□ 0.07
CDK7P50613 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.51■□□□□ 0.07
CDK7P50613 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 RN7SL121P-201ENST00000584223 273 ntBASIC15.51■□□□□ 0.07
CDK7P50613 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDK7P50613 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.51■□□□□ 0.07
CDK7P50613 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDK7P50613 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDK7P50613 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms