Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.3■□□□□ 0.04
EXTL3O43909 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EXTL3O43909 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EXTL3O43909 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EXTL3O43909 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
EXTL3O43909 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.3■□□□□ 0.04
EXTL3O43909 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
EXTL3O43909 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 FMO6P-201ENST00000236166 1620 ntBASIC15.29■□□□□ 0.04
EXTL3O43909 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EXTL3O43909 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
EXTL3O43909 AC098934.1-203ENST00000442868 1262 ntBASIC15.29■□□□□ 0.04
EXTL3O43909 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.29■□□□□ 0.04
EXTL3O43909 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.29■□□□□ 0.04
EXTL3O43909 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.29■□□□□ 0.04
EXTL3O43909 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.29■□□□□ 0.04
EXTL3O43909 MIR7845-201ENST00000618396 99 ntBASIC15.29■□□□□ 0.04
EXTL3O43909 AL353726.2-201ENST00000623259 884 ntBASIC15.29■□□□□ 0.04
EXTL3O43909 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EXTL3O43909 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EXTL3O43909 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EXTL3O43909 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EXTL3O43909 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
EXTL3O43909 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
EXTL3O43909 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.28■□□□□ 0.04
EXTL3O43909 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.28■□□□□ 0.04
EXTL3O43909 TEKT4P2-202ENST00000559466 1312 ntBASIC15.28■□□□□ 0.04
EXTL3O43909 AC092978.1-202ENST00000637590 1327 ntBASIC15.28■□□□□ 0.04
EXTL3O43909 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.28■□□□□ 0.04
EXTL3O43909 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EXTL3O43909 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EXTL3O43909 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EXTL3O43909 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.28■□□□□ 0.04
EXTL3O43909 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.28■□□□□ 0.04
EXTL3O43909 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.28■□□□□ 0.04
EXTL3O43909 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.28■□□□□ 0.04
EXTL3O43909 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.28■□□□□ 0.04
EXTL3O43909 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 AL627231.1-201ENST00000394467 1125 ntBASIC15.28■□□□□ 0.04
EXTL3O43909 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.28■□□□□ 0.04
EXTL3O43909 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 AL592076.1-201ENST00000424448 303 ntBASIC15.28■□□□□ 0.04
EXTL3O43909 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.28■□□□□ 0.04
EXTL3O43909 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EXTL3O43909 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
EXTL3O43909 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.28■□□□□ 0.04
EXTL3O43909 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.28■□□□□ 0.04
EXTL3O43909 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.28■□□□□ 0.04
EXTL3O43909 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.28■□□□□ 0.04
EXTL3O43909 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.28■□□□□ 0.04
EXTL3O43909 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.28■□□□□ 0.04
EXTL3O43909 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms