Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 AL136116.3-201ENST00000402907 1138 ntBASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 C17orf82-201ENST00000623772 1530 ntBASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGC4Q9Y5F7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PCDHGC4Q9Y5F7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGC4Q9Y5F7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGC4Q9Y5F7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGC4Q9Y5F7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHGC4Q9Y5F7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGC4Q9Y5F7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGC4Q9Y5F7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGC4Q9Y5F7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGC4Q9Y5F7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGC4Q9Y5F7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGC4Q9Y5F7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDHGC4Q9Y5F7 SRD5A1P1-201ENST00000442297 786 ntBASIC22.7■■□□□ 1.22
PCDHGC4Q9Y5F7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 AC079630.1-202ENST00000618127 1840 ntBASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGC4Q9Y5F7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 ANOS2P-203ENST00000472227 1816 ntBASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PCDHGC4Q9Y5F7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHGC4Q9Y5F7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGC4Q9Y5F7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGC4Q9Y5F7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGC4Q9Y5F7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGC4Q9Y5F7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGC4Q9Y5F7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGC4Q9Y5F7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGC4Q9Y5F7 AC144652.1-201ENST00000609974 1624 ntBASIC22.65■■□□□ 1.22
PCDHGC4Q9Y5F7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHGC4Q9Y5F7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGC4Q9Y5F7 AC099791.2-201ENST00000605725 427 ntBASIC22.65■■□□□ 1.22
PCDHGC4Q9Y5F7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGC4Q9Y5F7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGC4Q9Y5F7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGC4Q9Y5F7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDHGC4Q9Y5F7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDHGC4Q9Y5F7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHGC4Q9Y5F7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms