Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 KRT8P33-201ENST00000508125 1423 ntBASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRTM1Q9HBL6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 YBX1P4-201ENST00000392794 808 ntBASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRTM1Q9HBL6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LRTM1Q9HBL6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 AC103724.3-201ENST00000564481 992 ntBASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM1Q9HBL6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRTM1Q9HBL6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LRTM1Q9HBL6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.58■■□□□ 1.05
LRTM1Q9HBL6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRTM1Q9HBL6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRTM1Q9HBL6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRTM1Q9HBL6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.58■■□□□ 1.05
LRTM1Q9HBL6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRTM1Q9HBL6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.57■■□□□ 1.04
LRTM1Q9HBL6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.57■■□□□ 1.04
LRTM1Q9HBL6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRTM1Q9HBL6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRTM1Q9HBL6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRTM1Q9HBL6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRTM1Q9HBL6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 SNX5-217ENST00000606557 1087 ntBASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRTM1Q9HBL6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM1Q9HBL6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRTM1Q9HBL6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 AC137630.3-201ENST00000607245 391 ntBASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRTM1Q9HBL6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.52■■□□□ 1.04
LRTM1Q9HBL6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LRTM1Q9HBL6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.52■■□□□ 1.04
LRTM1Q9HBL6 AL031848.2-201ENST00000607670 837 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms