Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
LRCH3Q96II8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.58■■□□□ 1.53
LRCH3Q96II8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LRCH3Q96II8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
LRCH3Q96II8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRCH3Q96II8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRCH3Q96II8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.57■■□□□ 1.52
LRCH3Q96II8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRCH3Q96II8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRCH3Q96II8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.57■■□□□ 1.52
LRCH3Q96II8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LRCH3Q96II8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.57■■□□□ 1.52
LRCH3Q96II8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
LRCH3Q96II8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LRCH3Q96II8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LRCH3Q96II8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.57■■□□□ 1.52
LRCH3Q96II8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.56■■□□□ 1.52
LRCH3Q96II8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
LRCH3Q96II8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.56■■□□□ 1.52
LRCH3Q96II8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.55■■□□□ 1.52
LRCH3Q96II8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRCH3Q96II8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.55■■□□□ 1.52
LRCH3Q96II8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRCH3Q96II8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.55■■□□□ 1.52
LRCH3Q96II8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LRCH3Q96II8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.55■■□□□ 1.52
LRCH3Q96II8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LRCH3Q96II8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
LRCH3Q96II8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.55■■□□□ 1.52
LRCH3Q96II8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRCH3Q96II8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRCH3Q96II8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LRCH3Q96II8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.54■■□□□ 1.52
LRCH3Q96II8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
LRCH3Q96II8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
LRCH3Q96II8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.54■■□□□ 1.52
LRCH3Q96II8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.54■■□□□ 1.52
LRCH3Q96II8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.53■■□□□ 1.52
LRCH3Q96II8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
LRCH3Q96II8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
LRCH3Q96II8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.52■■□□□ 1.52
LRCH3Q96II8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRCH3Q96II8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.52■■□□□ 1.52
LRCH3Q96II8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.52■■□□□ 1.52
LRCH3Q96II8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRCH3Q96II8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRCH3Q96II8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LRCH3Q96II8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
LRCH3Q96II8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.51■■□□□ 1.51
LRCH3Q96II8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.51■■□□□ 1.51
LRCH3Q96II8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.51■■□□□ 1.51
LRCH3Q96II8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
LRCH3Q96II8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.51■■□□□ 1.51
LRCH3Q96II8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
LRCH3Q96II8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
LRCH3Q96II8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRCH3Q96II8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRCH3Q96II8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRCH3Q96II8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LRCH3Q96II8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRCH3Q96II8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.5■■□□□ 1.51
LRCH3Q96II8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
LRCH3Q96II8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.5■■□□□ 1.51
LRCH3Q96II8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LRCH3Q96II8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LRCH3Q96II8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.49■■□□□ 1.51
LRCH3Q96II8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.49■■□□□ 1.51
LRCH3Q96II8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LRCH3Q96II8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LRCH3Q96II8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
LRCH3Q96II8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
LRCH3Q96II8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LRCH3Q96II8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRCH3Q96II8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRCH3Q96II8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.48■■□□□ 1.51
LRCH3Q96II8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.48■■□□□ 1.51
LRCH3Q96II8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.48■■□□□ 1.51
LRCH3Q96II8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.48■■□□□ 1.51
LRCH3Q96II8 AC011767.1-201ENST00000617410 1153 ntBASIC24.48■■□□□ 1.51
LRCH3Q96II8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.48■■□□□ 1.51
LRCH3Q96II8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRCH3Q96II8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.47■■□□□ 1.51
LRCH3Q96II8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRCH3Q96II8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LRCH3Q96II8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.47■■□□□ 1.51
LRCH3Q96II8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRCH3Q96II8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LRCH3Q96II8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRCH3Q96II8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRCH3Q96II8 AP004609.3-201ENST00000610705 1884 ntBASIC24.47■■□□□ 1.51
LRCH3Q96II8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
LRCH3Q96II8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRCH3Q96II8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.46■■□□□ 1.51
LRCH3Q96II8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRCH3Q96II8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.46■■□□□ 1.51
LRCH3Q96II8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.46■■□□□ 1.51
LRCH3Q96II8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LRCH3Q96II8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.46■■□□□ 1.51
LRCH3Q96II8 AL138781.1-201ENST00000566567 1274 ntBASIC24.46■■□□□ 1.51
LRCH3Q96II8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms