Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFFLQ8WZ73 YBX1P4-201ENST00000392794 808 ntBASIC23.89■■□□□ 1.41
RFFLQ8WZ73 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
RFFLQ8WZ73 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RFFLQ8WZ73 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RFFLQ8WZ73 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RFFLQ8WZ73 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RFFLQ8WZ73 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.88■■□□□ 1.41
RFFLQ8WZ73 AC079630.1-202ENST00000618127 1840 ntBASIC23.88■■□□□ 1.41
RFFLQ8WZ73 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RFFLQ8WZ73 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RFFLQ8WZ73 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 MIR4508-201ENST00000584178 70 ntBASIC23.86■■□□□ 1.41
RFFLQ8WZ73 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RFFLQ8WZ73 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.85■■□□□ 1.41
RFFLQ8WZ73 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFFLQ8WZ73 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.85■■□□□ 1.41
RFFLQ8WZ73 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
RFFLQ8WZ73 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFFLQ8WZ73 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.85■■□□□ 1.41
RFFLQ8WZ73 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RFFLQ8WZ73 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.84■■□□□ 1.41
RFFLQ8WZ73 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFFLQ8WZ73 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RFFLQ8WZ73 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
RFFLQ8WZ73 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFFLQ8WZ73 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFFLQ8WZ73 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.81■■□□□ 1.4
RFFLQ8WZ73 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
RFFLQ8WZ73 GUSBP5-201ENST00000418136 578 ntBASIC23.81■■□□□ 1.4
RFFLQ8WZ73 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFFLQ8WZ73 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 EP400NL-214ENST00000641289 2402 ntBASIC23.8■■□□□ 1.4
RFFLQ8WZ73 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.8■■□□□ 1.4
RFFLQ8WZ73 GUSBP5-202ENST00000510805 1989 ntBASIC23.8■■□□□ 1.4
RFFLQ8WZ73 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.79■■□□□ 1.4
RFFLQ8WZ73 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RFFLQ8WZ73 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms