Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD3Q7Z3D4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD3Q7Z3D4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD3Q7Z3D4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LYSMD3Q7Z3D4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD3Q7Z3D4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 AC009102.2-201ENST00000606772 1639 ntBASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD3Q7Z3D4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 AC012676.1-201ENST00000574705 1949 ntBASIC22.59■■□□□ 1.21
LYSMD3Q7Z3D4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 AL512631.2-201ENST00000604634 923 ntBASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.58■■□□□ 1.21
LYSMD3Q7Z3D4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LYSMD3Q7Z3D4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LYSMD3Q7Z3D4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LYSMD3Q7Z3D4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 AC131281.2-201ENST00000520478 145 ntBASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD3Q7Z3D4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 AC008406.3-201ENST00000620001 1374 ntBASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.56■■□□□ 1.2
LYSMD3Q7Z3D4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
LYSMD3Q7Z3D4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 MIR4466-201ENST00000606121 54 ntBASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 ANOS2P-203ENST00000472227 1816 ntBASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD3Q7Z3D4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD3Q7Z3D4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
LYSMD3Q7Z3D4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD3Q7Z3D4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.53■■□□□ 1.2
LYSMD3Q7Z3D4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD3Q7Z3D4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD3Q7Z3D4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.53■■□□□ 1.2
LYSMD3Q7Z3D4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms