Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.43■□□□□ 0.71e-8■■■■□ 22.9
SND1Q7KZF4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.39■□□□□ 0.691e-8■■■■□ 22.9
SND1Q7KZF4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.321e-8■■■■□ 22.9
SND1Q7KZF4 SELENOF-205ENST00000469566 831 ntTSL 29.82□□□□□ -0.841e-8■■■■□ 22.9
SND1Q7KZF4 SELENOF-204ENST00000467557 499 ntTSL 57.93□□□□□ -1.141e-8■■■■□ 22.9
SND1Q7KZF4 BTD-211ENST00000482824 644 ntTSL 211.04□□□□□ -0.641e-10■■■■□ 22.9
SND1Q7KZF4 MAN1B1-201ENST00000371587 1485 ntTSL 1 (best)12.42□□□□□ -0.423e-8■■■■□ 22.9
SND1Q7KZF4 CPE-203ENST00000480404 437 ntTSL 219.43■□□□□ 0.71e-17■■■■□ 22.9
SND1Q7KZF4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.032e-7■■■■□ 22.9
SND1Q7KZF4 AGPAT5-203ENST00000523234 2525 ntTSL 514.19□□□□□ -0.142e-7■■■■□ 22.9
SND1Q7KZF4 AGPAT5-202ENST00000518327 852 ntTSL 1 (best)9.61□□□□□ -0.872e-7■■■■□ 22.9
SND1Q7KZF4 CADM1-214ENST00000543249 565 ntTSL 46.17□□□□□ -1.426e-7■■■■□ 22.8
SND1Q7KZF4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.12e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.222e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-215ENST00000537296 1511 ntTSL 211.17□□□□□ -0.622e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-216ENST00000538451 1345 ntTSL 210.58□□□□□ -0.714e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC10.38□□□□□ -0.752e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-223ENST00000545215 1340 ntTSL 1 (best)8.93□□□□□ -0.982e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.75□□□□□ -1.012e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.44□□□□□ -1.062e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.32□□□□□ -1.082e-19■■■■□ 22.8
SND1Q7KZF4 TM2D2-210ENST00000524331 544 ntTSL 27.84□□□□□ -1.151e-8■■■■□ 22.8
SND1Q7KZF4 LDHA-202ENST00000375710 2169 ntTSL 27.1□□□□□ -1.273e-19■■■■□ 22.8
SND1Q7KZF4 LDHA-219ENST00000541097 582 ntTSL 37□□□□□ -1.292e-19■■■■□ 22.8
SND1Q7KZF4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.656e-9■■■■□ 22.8
SND1Q7KZF4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.44■□□□□ 0.226e-9■■■■□ 22.8
SND1Q7KZF4 CD74-207ENST00000522153 556 ntTSL 213.7□□□□□ -0.229e-8■■■■□ 22.8
SND1Q7KZF4 VCAN-212ENST00000515397 536 ntTSL 211.85□□□□□ -0.513e-8■■■■□ 22.8
SND1Q7KZF4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.187e-7■■■■□ 22.8
SND1Q7KZF4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.69■■□□□ 1.067e-7■■■■□ 22.8
SND1Q7KZF4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.787e-7■■■■□ 22.8
SND1Q7KZF4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.747e-7■■■■□ 22.8
SND1Q7KZF4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.627e-7■■■■□ 22.8
SND1Q7KZF4 BCAP31-208ENST00000468947 409 ntTSL 25.29□□□□□ -1.564e-16■■■■□ 22.8
SND1Q7KZF4 EXT2-208ENST00000531161 747 ntTSL 410.07□□□□□ -0.86e-7■■■■□ 22.8
SND1Q7KZF4 TMEM59-209ENST00000470395 480 ntTSL 28.95□□□□□ -0.984e-9■■■■□ 22.8
SND1Q7KZF4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.08■□□□□ 0.972e-6■■■■□ 22.8
SND1Q7KZF4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.1■□□□□ 0.812e-6■■■■□ 22.8
SND1Q7KZF4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.542e-6■■■■□ 22.8
SND1Q7KZF4 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.142e-6■■■■□ 22.8
SND1Q7KZF4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.763e-7■■■■□ 22.8
SND1Q7KZF4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.94e-8■■■■□ 22.7
SND1Q7KZF4 NPC2-208ENST00000556009 699 ntTSL 518.27■□□□□ 0.524e-8■■■■□ 22.7
SND1Q7KZF4 NPC2-205ENST00000554482 583 ntTSL 211.55□□□□□ -0.564e-8■■■■□ 22.7
SND1Q7KZF4 NPC2-202ENST00000434013 875 ntTSL 2 BASIC11.37□□□□□ -0.594e-8■■■■□ 22.7
SND1Q7KZF4 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC9.7□□□□□ -0.864e-8■■■■□ 22.7
SND1Q7KZF4 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC9.66□□□□□ -0.864e-8■■■■□ 22.7
SND1Q7KZF4 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC9.3□□□□□ -0.924e-8■■■■□ 22.7
SND1Q7KZF4 NPC2-204ENST00000553490 729 ntTSL 28.81□□□□□ -14e-8■■■■□ 22.7
SND1Q7KZF4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.04■■□□□ 1.923e-7■■■■□ 22.7
SND1Q7KZF4 OS9-209ENST00000547079 583 ntTSL 311.73□□□□□ -0.532e-8■■■■□ 22.7
SND1Q7KZF4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.792e-8■■■■□ 22.7
SND1Q7KZF4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.552e-8■■■■□ 22.7
SND1Q7KZF4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.42■□□□□ 0.542e-8■■■■□ 22.7
SND1Q7KZF4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.442e-8■■■■□ 22.7
SND1Q7KZF4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.57■□□□□ 0.42e-8■■■■□ 22.7
SND1Q7KZF4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.262e-8■■■■□ 22.7
SND1Q7KZF4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.89■□□□□ 0.132e-8■■■■□ 22.7
SND1Q7KZF4 ARSA-207ENST00000608497 576 ntTSL 314.28□□□□□ -0.128e-8■■■■□ 22.7
SND1Q7KZF4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.942e-7■■■■□ 22.7
SND1Q7KZF4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.02■□□□□ 0.642e-7■■■■□ 22.7
SND1Q7KZF4 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.332e-7■■■■□ 22.7
SND1Q7KZF4 SLC1A2-207ENST00000531628 597 ntTSL 56.26□□□□□ -1.417e-8■■■■□ 22.7
SND1Q7KZF4 M6PR-203ENST00000537621 581 ntTSL 210.17□□□□□ -0.784e-8■■■■□ 22.7
SND1Q7KZF4 OS9-217ENST00000550848 558 ntTSL 511.7□□□□□ -0.545e-8■■■■□ 22.7
SND1Q7KZF4 MIR4721-201ENST00000577590 89 ntBASIC11.65□□□□□ -0.542e-61■■■■□ 22.7
SND1Q7KZF4 LOX-202ENST00000503759 1643 ntTSL 220.88■□□□□ 0.933e-6■■■■□ 22.7
SND1Q7KZF4 LOX-205ENST00000513319 1543 ntTSL 1 (best)8.03□□□□□ -1.123e-6■■■■□ 22.7
SND1Q7KZF4 P3H1-211ENST00000472802 646 ntTSL 214.43□□□□□ -0.15e-9■■■■□ 22.7
SND1Q7KZF4 GPR78-206ENST00000513120 3720 ntTSL 213.06□□□□□ -0.322e-6■■■■□ 22.7
SND1Q7KZF4 NPTN-206ENST00000563753 599 ntTSL 215.83■□□□□ 0.122e-7■■■■□ 22.7
SND1Q7KZF4 NPTN-210ENST00000567198 571 ntTSL 413.94□□□□□ -0.182e-7■■■■□ 22.7
SND1Q7KZF4 TSPAN6-202ENST00000494424 820 ntTSL 26.73□□□□□ -1.331e-7■■■■□ 22.7
SND1Q7KZF4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.06■■□□□ 1.122e-16■■■■□ 22.7
SND1Q7KZF4 POFUT1-205ENST00000486717 959 ntTSL 217.3■□□□□ 0.362e-16■■■■□ 22.7
SND1Q7KZF4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.12e-16■■■■□ 22.7
SND1Q7KZF4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.93■■□□□ 1.91e-6■■■■□ 22.6
SND1Q7KZF4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.42■□□□□ 0.541e-6■■■■□ 22.6
SND1Q7KZF4 TPP1-210ENST00000528807 585 ntTSL 219.19■□□□□ 0.661e-8■■■■□ 22.6
SND1Q7KZF4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.269e-18■■■■□ 22.6
SND1Q7KZF4 ILVBL-203ENST00000525880 687 ntTSL 214.48□□□□□ -0.093e-8■■■■□ 22.6
SND1Q7KZF4 ILVBL-211ENST00000596093 576 ntTSL 212.42□□□□□ -0.423e-8■■■■□ 22.6
SND1Q7KZF4 CEPT1-209ENST00000498239 1957 ntTSL 1 (best)12.94□□□□□ -0.349e-7■■■■□ 22.6
SND1Q7KZF4 CEPT1-201ENST00000357172 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.399e-7■■■■□ 22.6
SND1Q7KZF4 CEPT1-210ENST00000545121 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.519e-7■■■■□ 22.6
SND1Q7KZF4 CEPT1-206ENST00000478042 2175 ntTSL 59.94□□□□□ -0.829e-7■■■■□ 22.6
SND1Q7KZF4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC9.72□□□□□ -0.859e-7■■■■□ 22.6
SND1Q7KZF4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC16.21■□□□□ 0.191e-6■■■■□ 22.6
SND1Q7KZF4 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.32■□□□□ 0.041e-6■■■■□ 22.6
SND1Q7KZF4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.241e-6■■■■□ 22.6
SND1Q7KZF4 ERAP1-203ENST00000503311 463 ntTSL 48.55□□□□□ -1.045e-7■■■■□ 22.6
SND1Q7KZF4 H3F3A-202ENST00000366814 1863 ntTSL 2 BASIC11.57□□□□□ -0.563e-10■■■■□ 22.6
SND1Q7KZF4 EMC1-201ENST00000375199 5408 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.422e-7■■■■□ 22.6
SND1Q7KZF4 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.542e-7■■■■□ 22.6
SND1Q7KZF4 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC10.19□□□□□ -0.782e-7■■■■□ 22.6
SND1Q7KZF4 PLD3-209ENST00000475983 731 ntTSL 214.07□□□□□ -0.162e-10■■■■□ 22.6
SND1Q7KZF4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.87■□□□□ 0.459e-8■■■■□ 22.6
SND1Q7KZF4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.349e-8■■■■□ 22.6
SND1Q7KZF4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.339e-8■■■■□ 22.6
Retrieved 100 of 13,567 protein–RNA pairs in 96 ms