RNA–Protein interactions for RNA: ENST00000469566.5

SELENOF-205, Transcript of selenoprotein F, humanhuman

TSL 2

Gene SELENOF, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-205ENST00000469566 AEBP2Q6ZN18 517 aaPredicted RBP27.73■■■□□ 2.03
SELENOF-205ENST00000469566 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
SELENOF-205ENST00000469566 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
SELENOF-205ENST00000469566 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
SELENOF-205ENST00000469566 PHF23Q9BUL5 403 aaPredicted RBP23.32■■□□□ 1.32
SELENOF-205ENST00000469566 FOXD1Q16676 465 aa22.16■■□□□ 1.14
SELENOF-205ENST00000469566 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
SELENOF-205ENST00000469566 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
SELENOF-205ENST00000469566 ABCC9O60706 1549 aa20.98■□□□□ 0.95
SELENOF-205ENST00000469566 MSH5O43196 834 aa20.82■□□□□ 0.92
SELENOF-205ENST00000469566 PIAS4Q8N2W9 510 aaPredicted RBP20.54■□□□□ 0.88
SELENOF-205ENST00000469566 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
SELENOF-205ENST00000469566 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
SELENOF-205ENST00000469566 ADRA2BP18089 450 aa20.29■□□□□ 0.84
SELENOF-205ENST00000469566 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
SELENOF-205ENST00000469566 RB1CC1Q8TDY2 1594 aa19.93■□□□□ 0.78
SELENOF-205ENST00000469566 NACADO15069 1562 aa19.85■□□□□ 0.77
SELENOF-205ENST00000469566 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
SELENOF-205ENST00000469566 ZCCHC6Q5VYS8 1495 aaKnown RBP19.64■□□□□ 0.73
SELENOF-205ENST00000469566 MYO15BQ96JP2 1530 aa19.62■□□□□ 0.73
SELENOF-205ENST00000469566 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
SELENOF-205ENST00000469566 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
SELENOF-205ENST00000469566 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
SELENOF-205ENST00000469566 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
SELENOF-205ENST00000469566 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
SELENOF-205ENST00000469566 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
SELENOF-205ENST00000469566 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
SELENOF-205ENST00000469566 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
SELENOF-205ENST00000469566 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.6
SELENOF-205ENST00000469566 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
SELENOF-205ENST00000469566 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
SELENOF-205ENST00000469566 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
SELENOF-205ENST00000469566 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
SELENOF-205ENST00000469566 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
SELENOF-205ENST00000469566 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
SELENOF-205ENST00000469566 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
SELENOF-205ENST00000469566 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
SELENOF-205ENST00000469566 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
SELENOF-205ENST00000469566 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
SELENOF-205ENST00000469566 HMGXB3Q12766 1538 aa18.2■□□□□ 0.5
SELENOF-205ENST00000469566 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
SELENOF-205ENST00000469566 PEG3Q9GZU2 1588 aa18.16■□□□□ 0.5
SELENOF-205ENST00000469566 NESP48681 1621 aa18.1■□□□□ 0.49
SELENOF-205ENST00000469566 WIZO95785 1651 aa18.04■□□□□ 0.48
SELENOF-205ENST00000469566 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
SELENOF-205ENST00000469566 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
SELENOF-205ENST00000469566 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
SELENOF-205ENST00000469566 CUX2O14529 1486 aa17.88■□□□□ 0.45
SELENOF-205ENST00000469566 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
SELENOF-205ENST00000469566 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
SELENOF-205ENST00000469566 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
SELENOF-205ENST00000469566 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
SELENOF-205ENST00000469566 HOXD11P31277 338 aaPredicted RBP17.79■□□□□ 0.44
SELENOF-205ENST00000469566 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
SELENOF-205ENST00000469566 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
SELENOF-205ENST00000469566 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
SELENOF-205ENST00000469566 RNF39Q9H2S5 420 aa17.77■□□□□ 0.44
SELENOF-205ENST00000469566 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
SELENOF-205ENST00000469566 CFTRP13569 1480 aa17.68■□□□□ 0.42
SELENOF-205ENST00000469566 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
SELENOF-205ENST00000469566 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
SELENOF-205ENST00000469566 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
SELENOF-205ENST00000469566 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
SELENOF-205ENST00000469566 WDR62O43379 1518 aa17.58■□□□□ 0.41
SELENOF-205ENST00000469566 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
SELENOF-205ENST00000469566 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
SELENOF-205ENST00000469566 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
SELENOF-205ENST00000469566 C1QBPQ07021 282 aaKnown RBP17.44■□□□□ 0.38
SELENOF-205ENST00000469566 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
SELENOF-205ENST00000469566 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
SELENOF-205ENST00000469566 TOPBP1Q92547 1522 aa17.33■□□□□ 0.37
SELENOF-205ENST00000469566 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
SELENOF-205ENST00000469566 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
SELENOF-205ENST00000469566 DNMBPQ6XZF7 1577 aa17.25■□□□□ 0.35
SELENOF-205ENST00000469566 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
SELENOF-205ENST00000469566 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
SELENOF-205ENST00000469566 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
SELENOF-205ENST00000469566 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
SELENOF-205ENST00000469566 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
SELENOF-205ENST00000469566 CUX1P39880 1505 aa17.15■□□□□ 0.34
SELENOF-205ENST00000469566 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
SELENOF-205ENST00000469566 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
SELENOF-205ENST00000469566 SOGA1O94964 1423 aa17.12■□□□□ 0.33
SELENOF-205ENST00000469566 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
SELENOF-205ENST00000469566 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
SELENOF-205ENST00000469566 TRIM41Q8WV44 630 aa17.08■□□□□ 0.32
SELENOF-205ENST00000469566 FBLN2P98095 1184 aa17.01■□□□□ 0.31
SELENOF-205ENST00000469566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
SELENOF-205ENST00000469566 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
SELENOF-205ENST00000469566 CHD1O14646 1710 aa16.94■□□□□ 0.3
SELENOF-205ENST00000469566 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
SELENOF-205ENST00000469566 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
SELENOF-205ENST00000469566 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
SELENOF-205ENST00000469566 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
SELENOF-205ENST00000469566 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
SELENOF-205ENST00000469566 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
SELENOF-205ENST00000469566 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
SELENOF-205ENST00000469566 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
SELENOF-205ENST00000469566 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
SELENOF-205ENST00000469566 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms