Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.19■□□□□ 0.98
RAB38P57729 AC079630.1-202ENST00000618127 1840 ntBASIC21.19■□□□□ 0.98
RAB38P57729 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB38P57729 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB38P57729 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB38P57729 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB38P57729 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RAB38P57729 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB38P57729 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB38P57729 ANOS2P-203ENST00000472227 1816 ntBASIC21.18■□□□□ 0.98
RAB38P57729 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RAB38P57729 SRD5A1P1-201ENST00000442297 786 ntBASIC21.18■□□□□ 0.98
RAB38P57729 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB38P57729 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RAB38P57729 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB38P57729 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.18■□□□□ 0.98
RAB38P57729 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB38P57729 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB38P57729 AC144652.1-201ENST00000609974 1624 ntBASIC21.18■□□□□ 0.98
RAB38P57729 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB38P57729 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB38P57729 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB38P57729 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB38P57729 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.17■□□□□ 0.98
RAB38P57729 AC008406.3-201ENST00000620001 1374 ntBASIC21.17■□□□□ 0.98
RAB38P57729 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.17■□□□□ 0.98
RAB38P57729 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB38P57729 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB38P57729 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.17■□□□□ 0.98
RAB38P57729 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB38P57729 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.17■□□□□ 0.98
RAB38P57729 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB38P57729 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB38P57729 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB38P57729 AL136116.3-201ENST00000402907 1138 ntBASIC21.16■□□□□ 0.98
RAB38P57729 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB38P57729 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB38P57729 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB38P57729 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB38P57729 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.15■□□□□ 0.98
RAB38P57729 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB38P57729 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB38P57729 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB38P57729 FP325331.1-202ENST00000623531 1380 ntBASIC21.15■□□□□ 0.98
RAB38P57729 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.15■□□□□ 0.98
RAB38P57729 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB38P57729 AC092068.2-201ENST00000590491 1708 ntBASIC21.15■□□□□ 0.98
RAB38P57729 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB38P57729 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.15■□□□□ 0.98
RAB38P57729 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RAB38P57729 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB38P57729 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB38P57729 AC241377.3-202ENST00000626088 1088 ntBASIC21.14■□□□□ 0.97
RAB38P57729 AC241585.3-202ENST00000628937 1088 ntBASIC21.14■□□□□ 0.97
RAB38P57729 AC245100.8-202ENST00000629247 1058 ntBASIC21.14■□□□□ 0.97
RAB38P57729 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB38P57729 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB38P57729 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB38P57729 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB38P57729 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RAB38P57729 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB38P57729 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB38P57729 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RAB38P57729 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAB38P57729 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RAB38P57729 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RAB38P57729 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.13■□□□□ 0.97
RAB38P57729 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.13■□□□□ 0.97
RAB38P57729 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RAB38P57729 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB38P57729 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB38P57729 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RAB38P57729 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAB38P57729 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB38P57729 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB38P57729 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RAB38P57729 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB38P57729 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RAB38P57729 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.12■□□□□ 0.97
RAB38P57729 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB38P57729 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.12■□□□□ 0.97
RAB38P57729 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RAB38P57729 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB38P57729 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RAB38P57729 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB38P57729 LINC01529-204ENST00000636474 1715 ntBASIC21.11■□□□□ 0.97
RAB38P57729 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
RAB38P57729 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RAB38P57729 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB38P57729 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB38P57729 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB38P57729 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.1■□□□□ 0.97
RAB38P57729 DUX4L4-201ENST00000566884 1269 ntBASIC21.1■□□□□ 0.97
RAB38P57729 AC099791.2-201ENST00000605725 427 ntBASIC21.1■□□□□ 0.97
RAB38P57729 AC092171.4-201ENST00000609130 632 ntBASIC21.1■□□□□ 0.97
RAB38P57729 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RAB38P57729 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RAB38P57729 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB38P57729 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAB38P57729 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms