Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 AC079630.1-202ENST00000618127 1840 ntBASIC20.78■□□□□ 0.92
LGI1O95970 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI1O95970 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LGI1O95970 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LGI1O95970 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LGI1O95970 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LGI1O95970 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LGI1O95970 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LGI1O95970 AC103834.1-201ENST00000520383 144 ntBASIC20.77■□□□□ 0.92
LGI1O95970 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.77■□□□□ 0.92
LGI1O95970 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.77■□□□□ 0.92
LGI1O95970 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LGI1O95970 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LGI1O95970 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.77■□□□□ 0.92
LGI1O95970 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LGI1O95970 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LGI1O95970 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LGI1O95970 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LGI1O95970 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LGI1O95970 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
LGI1O95970 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.76■□□□□ 0.91
LGI1O95970 YBX1P4-201ENST00000392794 808 ntBASIC20.76■□□□□ 0.91
LGI1O95970 RARRES2P1-201ENST00000474487 481 ntBASIC20.76■□□□□ 0.91
LGI1O95970 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LGI1O95970 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LGI1O95970 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LGI1O95970 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LGI1O95970 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.76■□□□□ 0.91
LGI1O95970 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LGI1O95970 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LGI1O95970 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LGI1O95970 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LGI1O95970 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LGI1O95970 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LGI1O95970 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LGI1O95970 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.75■□□□□ 0.91
LGI1O95970 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.75■□□□□ 0.91
LGI1O95970 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.75■□□□□ 0.91
LGI1O95970 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LGI1O95970 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LGI1O95970 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.75■□□□□ 0.91
LGI1O95970 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LGI1O95970 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LGI1O95970 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LGI1O95970 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LGI1O95970 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.74■□□□□ 0.91
LGI1O95970 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LGI1O95970 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LGI1O95970 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI1O95970 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI1O95970 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LGI1O95970 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI1O95970 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI1O95970 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LGI1O95970 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.73■□□□□ 0.91
LGI1O95970 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI1O95970 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LGI1O95970 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.73■□□□□ 0.91
LGI1O95970 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI1O95970 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.73■□□□□ 0.91
LGI1O95970 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.72■□□□□ 0.91
LGI1O95970 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
LGI1O95970 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI1O95970 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI1O95970 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LGI1O95970 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LGI1O95970 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI1O95970 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI1O95970 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.72■□□□□ 0.91
LGI1O95970 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI1O95970 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI1O95970 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.72■□□□□ 0.91
LGI1O95970 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI1O95970 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI1O95970 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI1O95970 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI1O95970 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI1O95970 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI1O95970 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LGI1O95970 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LGI1O95970 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LGI1O95970 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
LGI1O95970 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.7■□□□□ 0.9
LGI1O95970 AC103724.3-201ENST00000564481 992 ntBASIC20.7■□□□□ 0.9
LGI1O95970 SNX5-217ENST00000606557 1087 ntBASIC20.7■□□□□ 0.9
LGI1O95970 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LGI1O95970 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LGI1O95970 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.69■□□□□ 0.9
LGI1O95970 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms