Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA12O60330 AC006455.2-201ENST00000429931 906 ntBASIC22.25■■□□□ 1.15
PCDHGA12O60330 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGA12O60330 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA12O60330 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGA12O60330 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PCDHGA12O60330 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA12O60330 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.24■■□□□ 1.15
PCDHGA12O60330 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGA12O60330 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGA12O60330 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHGA12O60330 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA12O60330 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA12O60330 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA12O60330 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA12O60330 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA12O60330 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA12O60330 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA12O60330 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA12O60330 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA12O60330 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA12O60330 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA12O60330 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA12O60330 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA12O60330 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PCDHGA12O60330 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA12O60330 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHGA12O60330 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA12O60330 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA12O60330 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA12O60330 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDHGA12O60330 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA12O60330 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDHGA12O60330 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA12O60330 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA12O60330 AL139125.2-201ENST00000623134 1869 ntBASIC22.22■■□□□ 1.15
PCDHGA12O60330 AC138932.3-201ENST00000567634 1902 ntBASIC22.21■■□□□ 1.15
PCDHGA12O60330 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA12O60330 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA12O60330 AC022211.4-201ENST00000625094 2161 ntBASIC22.21■■□□□ 1.15
PCDHGA12O60330 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA12O60330 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA12O60330 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA12O60330 AC034268.1-201ENST00000441047 882 ntBASIC22.21■■□□□ 1.15
PCDHGA12O60330 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.21■■□□□ 1.15
PCDHGA12O60330 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGA12O60330 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGA12O60330 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA12O60330 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA12O60330 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.2■■□□□ 1.15
PCDHGA12O60330 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.2■■□□□ 1.15
PCDHGA12O60330 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCDHGA12O60330 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.2■■□□□ 1.14
PCDHGA12O60330 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCDHGA12O60330 AL161729.1-201ENST00000604104 1402 ntBASIC22.2■■□□□ 1.14
PCDHGA12O60330 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGA12O60330 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA12O60330 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA12O60330 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA12O60330 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA12O60330 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA12O60330 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA12O60330 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHGA12O60330 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA12O60330 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA12O60330 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA12O60330 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA12O60330 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA12O60330 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA12O60330 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGA12O60330 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA12O60330 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA12O60330 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA12O60330 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA12O60330 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGA12O60330 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms