Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 GUSBP5-202ENST00000510805 1989 ntBASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV16A0A0A6YYK6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 AC007375.3-201ENST00000600936 2314 ntBASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 DUSP8P3-201ENST00000399571 1760 ntBASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV16A0A0A6YYK6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV16A0A0A6YYK6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 KRT18P60-201ENST00000312876 1297 ntBASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 AC139795.1-202ENST00000500444 432 ntBASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 AC012354.3-201ENST00000623734 483 ntBASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV16A0A0A6YYK6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 DUX4L9-201ENST00000449051 1259 ntBASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 AC129492.7-201ENST00000622992 756 ntBASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 AL121603.2-201ENST00000557373 2117 ntBASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms