Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IGKV2-28A0A075B6P5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
IGKV2-28A0A075B6P5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
IGKV2-28A0A075B6P5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.83□□□□□ -0.03
IGKV2-28A0A075B6P5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
IGKV2-28A0A075B6P5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 AC007029.1-201ENST00000604183 313 ntBASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IGKV2-28A0A075B6P5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.82□□□□□ -0.04
IGKV2-28A0A075B6P5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 SLC25A24-204ENST00000569674 2357 ntBASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV2-28A0A075B6P5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV2-28A0A075B6P5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 GPX1-201ENST00000419349 1106 ntBASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV2-28A0A075B6P5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV2-28A0A075B6P5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms