Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 RN7SL818P-201ENST00000485099 259 ntBASIC15.74■□□□□ 0.11
TRIM50Q86XT4 AC026410.1-201ENST00000507366 1101 ntBASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 RN7SL725P-201ENST00000606439 259 ntBASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 ODCP-201ENST00000459650 1639 ntBASIC15.74■□□□□ 0.11
TRIM50Q86XT4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM50Q86XT4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 SHMT1P1-201ENST00000419974 1312 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 TUBB8P4-201ENST00000511806 1324 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 RPL13AP3-202ENST00000494676 1473 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 BX640514.1-201ENST00000583223 1918 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 USP17L6P-201ENST00000382470 1197 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 RPL3P2-204ENST00000413027 1203 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 AC002044.2-201ENST00000624910 970 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 LINC00244-201ENST00000625073 613 ntBASIC15.73■□□□□ 0.11
TRIM50Q86XT4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM50Q86XT4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms