Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
MDH1P40925 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.22□□□□□ -0.13
MDH1P40925 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MDH1P40925 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
MDH1P40925 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 FLJ30679-201ENST00000624773 1980 ntBASIC14.22□□□□□ -0.13
MDH1P40925 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MDH1P40925 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC14.21□□□□□ -0.13
MDH1P40925 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.21□□□□□ -0.13
MDH1P40925 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 FKBP4P6-201ENST00000457486 1332 ntBASIC14.21□□□□□ -0.13
MDH1P40925 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC14.21□□□□□ -0.13
MDH1P40925 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC14.21□□□□□ -0.13
MDH1P40925 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.21□□□□□ -0.13
MDH1P40925 INTS4P2-202ENST00000614726 2019 ntBASIC14.21□□□□□ -0.13
MDH1P40925 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
MDH1P40925 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.21□□□□□ -0.13
MDH1P40925 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MDH1P40925 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.21□□□□□ -0.13
MDH1P40925 SSR4P1-201ENST00000415143 412 ntBASIC14.21□□□□□ -0.13
MDH1P40925 HMGA1P1-201ENST00000415560 1062 ntBASIC14.21□□□□□ -0.13
MDH1P40925 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
MDH1P40925 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.21□□□□□ -0.13
MDH1P40925 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.21□□□□□ -0.13
MDH1P40925 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.21□□□□□ -0.13
MDH1P40925 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.21□□□□□ -0.13
MDH1P40925 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.21□□□□□ -0.13
MDH1P40925 KRT18P58-201ENST00000527480 1120 ntBASIC14.21□□□□□ -0.13
MDH1P40925 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.21□□□□□ -0.13
MDH1P40925 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.21□□□□□ -0.13
MDH1P40925 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.21□□□□□ -0.13
MDH1P40925 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
MDH1P40925 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
MDH1P40925 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.21□□□□□ -0.13
MDH1P40925 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.21□□□□□ -0.13
MDH1P40925 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.21□□□□□ -0.13
MDH1P40925 AC073592.8-201ENST00000624126 511 ntBASIC14.21□□□□□ -0.13
MDH1P40925 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.21□□□□□ -0.13
MDH1P40925 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MDH1P40925 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.21□□□□□ -0.14
MDH1P40925 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.21□□□□□ -0.14
MDH1P40925 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.21□□□□□ -0.14
MDH1P40925 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 AC092139.4-201ENST00000624318 2794 ntBASIC14.21□□□□□ -0.14
MDH1P40925 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 AC009093.2-202ENST00000620513 2079 ntBASIC14.21□□□□□ -0.14
MDH1P40925 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MDH1P40925 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC14.21□□□□□ -0.14
MDH1P40925 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MDH1P40925 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
MDH1P40925 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 AL132642.2-201ENST00000623423 1998 ntBASIC14.2□□□□□ -0.14
MDH1P40925 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MDH1P40925 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MDH1P40925 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.2□□□□□ -0.14
MDH1P40925 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC14.2□□□□□ -0.14
MDH1P40925 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MDH1P40925 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MDH1P40925 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms