Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK2O00526 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.39□□□□□ -0.59
UPK2O00526 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.39□□□□□ -0.59
UPK2O00526 AL512343.1-201ENST00000605837 169 ntBASIC11.39□□□□□ -0.59
UPK2O00526 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.39□□□□□ -0.59
UPK2O00526 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 AC018629.1-201ENST00000623381 1736 ntBASIC11.39□□□□□ -0.59
UPK2O00526 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UPK2O00526 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
UPK2O00526 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.39□□□□□ -0.59
UPK2O00526 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.39□□□□□ -0.59
UPK2O00526 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
UPK2O00526 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
UPK2O00526 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
UPK2O00526 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
UPK2O00526 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UPK2O00526 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 RPL13AP3-202ENST00000494676 1473 ntBASIC11.38□□□□□ -0.59
UPK2O00526 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.38□□□□□ -0.59
UPK2O00526 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 STRCP1-201ENST00000509801 5328 ntBASIC11.38□□□□□ -0.59
UPK2O00526 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
UPK2O00526 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.38□□□□□ -0.59
UPK2O00526 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK2O00526 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 POM121L10P-201ENST00000436994 1285 ntBASIC11.38□□□□□ -0.59
UPK2O00526 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK2O00526 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK2O00526 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SCARNA21-201ENST00000517026 139 ntBASIC11.38□□□□□ -0.59
UPK2O00526 AC104989.1-201ENST00000519711 778 ntBASIC11.38□□□□□ -0.59
UPK2O00526 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK2O00526 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK2O00526 AC008805.1-201ENST00000590892 364 ntBASIC11.38□□□□□ -0.59
UPK2O00526 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK2O00526 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.38□□□□□ -0.59
UPK2O00526 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 AL162274.1-201ENST00000617191 1098 ntBASIC11.38□□□□□ -0.59
UPK2O00526 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.38□□□□□ -0.59
UPK2O00526 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.38□□□□□ -0.59
UPK2O00526 AC105233.6-201ENST00000642093 218 ntBASIC11.38□□□□□ -0.59
UPK2O00526 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
UPK2O00526 AL355102.3-201ENST00000554299 1678 ntBASIC11.38□□□□□ -0.59
UPK2O00526 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UPK2O00526 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UPK2O00526 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
UPK2O00526 MKRN5P-201ENST00000445263 1467 ntBASIC11.38□□□□□ -0.59
UPK2O00526 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms