Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 MIR6769A-201ENST00000617340 73 ntBASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 AC083964.2-201ENST00000623988 2396 ntBASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 KRT8P24-201ENST00000560290 1559 ntBASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CLDND2Q8NHS1 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 AC016397.2-201ENST00000624848 1985 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 TSPY25P-201ENST00000429463 745 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 MPRIPP1-201ENST00000452433 1089 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 RN7SL258P-201ENST00000478664 300 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 AC019193.1-201ENST00000506678 823 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 AC008723.1-201ENST00000506922 207 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 MIR3188-201ENST00000583494 85 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 MEG3_2.1-201ENST00000611456 105 ntBASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CLDND2Q8NHS1 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms