Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 AC015909.3-201ENST00000572855 1794 ntBASIC13.5□□□□□ -0.25
SKP1P63208 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.49□□□□□ -0.25
SKP1P63208 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SKP1P63208 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SKP1P63208 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.49□□□□□ -0.25
SKP1P63208 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.49□□□□□ -0.25
SKP1P63208 BANF1P3-201ENST00000412556 261 ntBASIC13.49□□□□□ -0.25
SKP1P63208 RPS9P1-201ENST00000419943 583 ntBASIC13.49□□□□□ -0.25
SKP1P63208 AC007274.2-201ENST00000421675 662 ntBASIC13.49□□□□□ -0.25
SKP1P63208 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SKP1P63208 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SKP1P63208 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SKP1P63208 PHBP15-201ENST00000574228 665 ntBASIC13.49□□□□□ -0.25
SKP1P63208 KRT18P8-201ENST00000581937 1246 ntBASIC13.49□□□□□ -0.25
SKP1P63208 MIR4754-201ENST00000582477 89 ntBASIC13.49□□□□□ -0.25
SKP1P63208 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.49□□□□□ -0.25
SKP1P63208 AC020922.3-201ENST00000595064 547 ntBASIC13.49□□□□□ -0.25
SKP1P63208 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.49□□□□□ -0.25
SKP1P63208 AL353770.1-201ENST00000614915 403 ntBASIC13.49□□□□□ -0.25
SKP1P63208 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 AC090643.2-201ENST00000623442 2029 ntBASIC13.49□□□□□ -0.25
SKP1P63208 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SKP1P63208 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.49□□□□□ -0.25
SKP1P63208 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SKP1P63208 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.49□□□□□ -0.25
SKP1P63208 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 BRD7P5-201ENST00000299197 1822 ntBASIC13.48□□□□□ -0.25
SKP1P63208 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 AC027601.5-201ENST00000624065 2482 ntBASIC13.48□□□□□ -0.25
SKP1P63208 LINC00115-201ENST00000473798 1317 ntBASIC13.48□□□□□ -0.25
SKP1P63208 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.48□□□□□ -0.25
SKP1P63208 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SKP1P63208 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 KRT17P5-201ENST00000332088 839 ntBASIC13.48□□□□□ -0.25
SKP1P63208 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 BX679664.3-201ENST00000414070 555 ntBASIC13.48□□□□□ -0.25
SKP1P63208 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SKP1P63208 AC026320.2-201ENST00000434379 478 ntBASIC13.48□□□□□ -0.25
SKP1P63208 RPSAP15-201ENST00000448168 861 ntBASIC13.48□□□□□ -0.25
SKP1P63208 AC113935.1-201ENST00000471722 555 ntBASIC13.48□□□□□ -0.25
SKP1P63208 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms