Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.94□□□□□ -0.5
CD74P04233 TMEM261P1-201ENST00000604899 340 ntBASIC11.94□□□□□ -0.5
CD74P04233 AC145423.3-201ENST00000615987 467 ntBASIC11.94□□□□□ -0.5
CD74P04233 AC134684.3-201ENST00000641758 218 ntBASIC11.94□□□□□ -0.5
CD74P04233 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 TNRC18P1-201ENST00000502875 3650 ntBASIC11.94□□□□□ -0.5
CD74P04233 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.94□□□□□ -0.5
CD74P04233 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.94□□□□□ -0.5
CD74P04233 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.94□□□□□ -0.5
CD74P04233 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD74P04233 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
CD74P04233 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 AC134407.3-201ENST00000624035 2139 ntBASIC11.93□□□□□ -0.5
CD74P04233 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CD74P04233 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 AC027369.3-201ENST00000530465 3707 ntBASIC11.93□□□□□ -0.5
CD74P04233 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 Z98885.3-201ENST00000624882 1757 ntBASIC11.93□□□□□ -0.5
CD74P04233 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CD74P04233 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.93□□□□□ -0.5
CD74P04233 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.93□□□□□ -0.5
CD74P04233 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.93□□□□□ -0.5
CD74P04233 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 RPSAP52-203ENST00000622976 1023 ntBASIC11.93□□□□□ -0.5
CD74P04233 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CD74P04233 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.93□□□□□ -0.5
CD74P04233 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.93□□□□□ -0.5
CD74P04233 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.93□□□□□ -0.5
CD74P04233 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CD74P04233 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC11.93□□□□□ -0.5
CD74P04233 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD74P04233 FMO6P-201ENST00000236166 1620 ntBASIC11.93□□□□□ -0.5
CD74P04233 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CD74P04233 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CD74P04233 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.93□□□□□ -0.5
CD74P04233 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 TMBIM7P-202ENST00000641474 1516 ntBASIC11.92□□□□□ -0.5
CD74P04233 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms