Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.42□□□□□ -0.74
APOC4P55056 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOC4P55056 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.42□□□□□ -0.74
APOC4P55056 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
APOC4P55056 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 LINC01815-202ENST00000641468 1409 ntBASIC10.41□□□□□ -0.74
APOC4P55056 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
APOC4P55056 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
APOC4P55056 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
APOC4P55056 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 MPV17-204ENST00000399052 749 ntTSL 4 BASIC10.41□□□□□ -0.74
APOC4P55056 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 OR8T1P-201ENST00000421347 918 ntBASIC10.41□□□□□ -0.74
APOC4P55056 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC10.41□□□□□ -0.74
APOC4P55056 AL512306.1-201ENST00000432698 848 ntBASIC10.41□□□□□ -0.74
APOC4P55056 ERP29P1-201ENST00000442902 706 ntBASIC10.41□□□□□ -0.74
APOC4P55056 AC098935.1-201ENST00000446057 611 ntBASIC10.41□□□□□ -0.74
APOC4P55056 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC10.41□□□□□ -0.74
APOC4P55056 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 AP002803.1-201ENST00000528836 498 ntBASIC10.41□□□□□ -0.74
APOC4P55056 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC10.41□□□□□ -0.74
APOC4P55056 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC10.41□□□□□ -0.74
APOC4P55056 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.41□□□□□ -0.74
APOC4P55056 AC145285.5-201ENST00000562217 361 ntBASIC10.41□□□□□ -0.74
APOC4P55056 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 AL133467.4-201ENST00000602953 725 ntBASIC10.41□□□□□ -0.74
APOC4P55056 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC10.41□□□□□ -0.74
APOC4P55056 AC009560.1-201ENST00000620208 434 ntBASIC10.41□□□□□ -0.74
APOC4P55056 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.41□□□□□ -0.74
APOC4P55056 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.41□□□□□ -0.74
APOC4P55056 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC10.41□□□□□ -0.74
APOC4P55056 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOC4P55056 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
APOC4P55056 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.41□□□□□ -0.74
APOC4P55056 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.41□□□□□ -0.74
APOC4P55056 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC10.41□□□□□ -0.74
APOC4P55056 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC10.4□□□□□ -0.74
APOC4P55056 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
APOC4P55056 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
APOC4P55056 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.4□□□□□ -0.74
APOC4P55056 LINC00115-201ENST00000473798 1317 ntBASIC10.4□□□□□ -0.74
APOC4P55056 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
APOC4P55056 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.4□□□□□ -0.74
APOC4P55056 AMT-256ENST00000638063 1783 ntTSL 5 BASIC10.4□□□□□ -0.74
APOC4P55056 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOC4P55056 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms