Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LILRP2-202ENST00000413572 1383 ntBASIC17.24■□□□□ 0.35
PDE6BP35913 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6BP35913 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6BP35913 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6BP35913 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDE6BP35913 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 AC104212.2-201ENST00000478813 628 ntBASIC17.23■□□□□ 0.35
PDE6BP35913 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.23■□□□□ 0.35
PDE6BP35913 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC17.23■□□□□ 0.35
PDE6BP35913 ANKRD26P1-203ENST00000569528 966 ntBASIC17.23■□□□□ 0.35
PDE6BP35913 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC17.23■□□□□ 0.35
PDE6BP35913 AC110057.1-201ENST00000636031 898 ntBASIC17.23■□□□□ 0.35
PDE6BP35913 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 AC067930.6-201ENST00000623257 4947 ntBASIC17.23■□□□□ 0.35
PDE6BP35913 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6BP35913 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6BP35913 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PDE6BP35913 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PDE6BP35913 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6BP35913 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6BP35913 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.22■□□□□ 0.35
PDE6BP35913 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.22■□□□□ 0.35
PDE6BP35913 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6BP35913 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDE6BP35913 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6BP35913 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.22■□□□□ 0.35
PDE6BP35913 AL136084.1-201ENST00000449172 318 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 AC015818.1-201ENST00000451011 244 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 VDAC1P11-201ENST00000458323 852 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC17.22■□□□□ 0.35
PDE6BP35913 MIR4326-201ENST00000582203 59 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 AL591424.3-201ENST00000614278 872 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 AC010531.8-201ENST00000623341 685 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.22■□□□□ 0.35
PDE6BP35913 TCAF2P1-201ENST00000291129 2421 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6BP35913 AC073347.1-201ENST00000421633 2643 ntBASIC17.22■□□□□ 0.35
PDE6BP35913 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PDE6BP35913 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.22■□□□□ 0.35
PDE6BP35913 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6BP35913 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6BP35913 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6BP35913 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDE6BP35913 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6BP35913 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms