Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.36□□□□□ -0.11
XPAP23025 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
XPAP23025 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.36□□□□□ -0.11
XPAP23025 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
XPAP23025 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.36□□□□□ -0.11
XPAP23025 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.36□□□□□ -0.11
XPAP23025 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.36□□□□□ -0.11
XPAP23025 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 MAGEA5-201ENST00000446757 942 ntBASIC14.36□□□□□ -0.11
XPAP23025 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
XPAP23025 AC007326.1-201ENST00000604539 458 ntBASIC14.36□□□□□ -0.11
XPAP23025 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 AF254983.2-201ENST00000612331 135 ntBASIC14.36□□□□□ -0.11
XPAP23025 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
XPAP23025 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.36□□□□□ -0.11
XPAP23025 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
XPAP23025 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC14.36□□□□□ -0.11
XPAP23025 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
XPAP23025 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
XPAP23025 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 TUBB8P4-201ENST00000511806 1324 ntBASIC14.36□□□□□ -0.11
XPAP23025 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 CAP2P1-201ENST00000557743 1390 ntBASIC14.35□□□□□ -0.11
XPAP23025 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 OR2K2-202ENST00000374428 1038 ntBASIC14.35□□□□□ -0.11
XPAP23025 AC073869.2-201ENST00000417338 1026 ntBASIC14.35□□□□□ -0.11
XPAP23025 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 EEF1DP6-201ENST00000449232 372 ntBASIC14.35□□□□□ -0.11
XPAP23025 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.35□□□□□ -0.11
XPAP23025 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.35□□□□□ -0.11
XPAP23025 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 AC114947.1-202ENST00000514136 344 ntBASIC14.35□□□□□ -0.11
XPAP23025 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.35□□□□□ -0.11
XPAP23025 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.35□□□□□ -0.11
XPAP23025 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.35□□□□□ -0.11
XPAP23025 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.35□□□□□ -0.11
XPAP23025 AL606495.2-201ENST00000605867 535 ntBASIC14.35□□□□□ -0.11
XPAP23025 AC015967.2-201ENST00000624092 234 ntBASIC14.35□□□□□ -0.11
XPAP23025 AC006435.4-201ENST00000625037 234 ntBASIC14.35□□□□□ -0.11
XPAP23025 AL356737.1-201ENST00000634391 234 ntBASIC14.35□□□□□ -0.11
XPAP23025 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 BRD7P5-201ENST00000299197 1822 ntBASIC14.35□□□□□ -0.11
XPAP23025 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 AL022313.4-201ENST00000562756 2046 ntBASIC14.35□□□□□ -0.11
XPAP23025 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms