Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.14■□□□□ 0.01
FAM228BP0C875 KRT17P8-201ENST00000540749 863 ntBASIC15.14■□□□□ 0.01
FAM228BP0C875 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.14■□□□□ 0.01
FAM228BP0C875 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.14■□□□□ 0.01
FAM228BP0C875 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.14■□□□□ 0.01
FAM228BP0C875 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.14■□□□□ 0.01
FAM228BP0C875 MIR3197-201ENST00000582241 73 ntBASIC15.14■□□□□ 0.01
FAM228BP0C875 EEF1DP1-201ENST00000585891 896 ntBASIC15.14■□□□□ 0.01
FAM228BP0C875 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FAM228BP0C875 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 SNORA50.1-201ENST00000628590 135 ntBASIC15.14■□□□□ 0.01
FAM228BP0C875 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.14■□□□□ 0.01
FAM228BP0C875 LINC01815-202ENST00000641468 1409 ntBASIC15.14■□□□□ 0.01
FAM228BP0C875 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
FAM228BP0C875 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM228BP0C875 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.14■□□□□ 0.01
FAM228BP0C875 LINC01165-201ENST00000445190 1623 ntBASIC15.14■□□□□ 0.01
FAM228BP0C875 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
FAM228BP0C875 FAM90A7P-201ENST00000382628 1395 ntBASIC15.13■□□□□ 0.01
FAM228BP0C875 FAM90A23P-201ENST00000400136 1395 ntBASIC15.13■□□□□ 0.01
FAM228BP0C875 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 AC087386.2-201ENST00000623212 4637 ntBASIC15.13■□□□□ 0.01
FAM228BP0C875 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.13■□□□□ 0.01
FAM228BP0C875 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.13■□□□□ 0.01
FAM228BP0C875 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.13■□□□□ 0.01
FAM228BP0C875 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 CR383656.12-201ENST00000549567 513 ntBASIC15.13■□□□□ 0.01
FAM228BP0C875 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.13■□□□□ 0.01
FAM228BP0C875 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.13■□□□□ 0.01
FAM228BP0C875 AL162274.1-201ENST00000617191 1098 ntBASIC15.13■□□□□ 0.01
FAM228BP0C875 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM228BP0C875 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
FAM228BP0C875 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM228BP0C875 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.12■□□□□ 0.01
FAM228BP0C875 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 AC008620.2-201ENST00000510294 1569 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 AC079776.1-201ENST00000401540 1152 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms