Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LINC01558Q9Y6Z2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 LMOD3-203ENST00000489031 2221 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 KRT8P14-201ENST00000414254 1442 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CYP2D8P-201ENST00000433633 1490 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CYP2AB1P-202ENST00000454440 1456 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 FAM197Y1-201ENST00000421178 764 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 SAMD11P1-201ENST00000571429 661 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AP000894.1-201ENST00000584430 520 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AC068338.3-201ENST00000617892 418 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 KLF17-201ENST00000372299 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 C2CD2-201ENST00000329623 5844 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ZNF423-205ENST00000562871 4514 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 CPEB4-207ENST00000519835 2257 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 AL136172.1-201ENST00000598590 1394 ntBASIC7.2□□□□□ -1.26
LINC01558Q9Y6Z2 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 SPATA3-AS1-201ENST00000414876 3508 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
LINC01558Q9Y6Z2 SLC24A1-202ENST00000339868 5678 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms