RNA–Protein interactions for RNA: ENST00000409301.5

AVL9-202, Transcript of AVL9 cell migration associated, humanhuman

TSL 5 BASIC

Gene AVL9, Length 4,336 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AVL9-202ENST00000409301 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
AVL9-202ENST00000409301 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
AVL9-202ENST00000409301 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
AVL9-202ENST00000409301 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
AVL9-202ENST00000409301 ABCC9O60706 1549 aa19.84■□□□□ 0.77
AVL9-202ENST00000409301 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
AVL9-202ENST00000409301 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
AVL9-202ENST00000409301 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.62
AVL9-202ENST00000409301 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
AVL9-202ENST00000409301 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
AVL9-202ENST00000409301 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
AVL9-202ENST00000409301 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
AVL9-202ENST00000409301 TRIM41Q8WV44 630 aa18.54■□□□□ 0.56
AVL9-202ENST00000409301 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
AVL9-202ENST00000409301 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
AVL9-202ENST00000409301 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
AVL9-202ENST00000409301 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
AVL9-202ENST00000409301 HRCP23327 699 aa18.37■□□□□ 0.53
AVL9-202ENST00000409301 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.52
AVL9-202ENST00000409301 MYT1Q01538 1121 aa18.3■□□□□ 0.52
AVL9-202ENST00000409301 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.52
AVL9-202ENST00000409301 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
AVL9-202ENST00000409301 APLP2Q06481 763 aa18.24■□□□□ 0.51
AVL9-202ENST00000409301 FBLN2P98095 1184 aa18.13■□□□□ 0.49
AVL9-202ENST00000409301 NACADO15069 1562 aa18.05■□□□□ 0.48
AVL9-202ENST00000409301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
AVL9-202ENST00000409301 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
AVL9-202ENST00000409301 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
AVL9-202ENST00000409301 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
AVL9-202ENST00000409301 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.44
AVL9-202ENST00000409301 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
AVL9-202ENST00000409301 CENPBP07199 599 aaPredicted RBP17.75■□□□□ 0.43
AVL9-202ENST00000409301 YTHDC1Q96MU7 727 aaKnown RBP17.69■□□□□ 0.42
AVL9-202ENST00000409301 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
AVL9-202ENST00000409301 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
AVL9-202ENST00000409301 ARID3CA6NKF2 412 aa17.64■□□□□ 0.41
AVL9-202ENST00000409301 P3H3Q8IVL6 736 aa17.59■□□□□ 0.41
AVL9-202ENST00000409301 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
AVL9-202ENST00000409301 ITGAEP38570 1179 aa17.56■□□□□ 0.4
AVL9-202ENST00000409301 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
AVL9-202ENST00000409301 ERCC6Q03468 1493 aa17.55■□□□□ 0.4
AVL9-202ENST00000409301 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
AVL9-202ENST00000409301 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
AVL9-202ENST00000409301 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
AVL9-202ENST00000409301 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
AVL9-202ENST00000409301 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
AVL9-202ENST00000409301 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
AVL9-202ENST00000409301 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
AVL9-202ENST00000409301 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
AVL9-202ENST00000409301 TRIM26Q12899 539 aaPredicted RBP17.33■□□□□ 0.37
AVL9-202ENST00000409301 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
AVL9-202ENST00000409301 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
AVL9-202ENST00000409301 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
AVL9-202ENST00000409301 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
AVL9-202ENST00000409301 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
AVL9-202ENST00000409301 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
AVL9-202ENST00000409301 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
AVL9-202ENST00000409301 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
AVL9-202ENST00000409301 ATAD2BQ9ULI0 1458 aa17.13■□□□□ 0.33
AVL9-202ENST00000409301 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
AVL9-202ENST00000409301 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
AVL9-202ENST00000409301 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
AVL9-202ENST00000409301 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
AVL9-202ENST00000409301 CADPSQ9ULU8 1353 aa17.05■□□□□ 0.32
AVL9-202ENST00000409301 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
AVL9-202ENST00000409301 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
AVL9-202ENST00000409301 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
AVL9-202ENST00000409301 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
AVL9-202ENST00000409301 WIZO95785 1651 aa17.01■□□□□ 0.31
AVL9-202ENST00000409301 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
AVL9-202ENST00000409301 BCL11AQ9H165 835 aa16.99■□□□□ 0.31
AVL9-202ENST00000409301 CDK11AQ9UQ88 783 aaPredicted RBP16.97■□□□□ 0.31
AVL9-202ENST00000409301 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
AVL9-202ENST00000409301 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
AVL9-202ENST00000409301 CUX2O14529 1486 aa16.89■□□□□ 0.29
AVL9-202ENST00000409301 SOGA1O94964 1423 aa16.88■□□□□ 0.29
AVL9-202ENST00000409301 KIF27Q86VH2 1401 aa16.88■□□□□ 0.29
AVL9-202ENST00000409301 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
AVL9-202ENST00000409301 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
AVL9-202ENST00000409301 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
AVL9-202ENST00000409301 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
AVL9-202ENST00000409301 BCANQ96GW7 911 aa16.84■□□□□ 0.29
AVL9-202ENST00000409301 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
AVL9-202ENST00000409301 NESP48681 1621 aa16.82■□□□□ 0.28
AVL9-202ENST00000409301 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
AVL9-202ENST00000409301 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
AVL9-202ENST00000409301 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
AVL9-202ENST00000409301 ABCC8Q09428 1581 aa16.79■□□□□ 0.28
AVL9-202ENST00000409301 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
AVL9-202ENST00000409301 CNGB1Q14028 1251 aaPredicted RBP16.79■□□□□ 0.28
AVL9-202ENST00000409301 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
AVL9-202ENST00000409301 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
AVL9-202ENST00000409301 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
AVL9-202ENST00000409301 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
AVL9-202ENST00000409301 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
AVL9-202ENST00000409301 ZNF326Q5BKZ1 582 aaKnown RBP16.71■□□□□ 0.27
AVL9-202ENST00000409301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.269e-7■■□□□ 12.4
AVL9-202ENST00000409301 NEFLP07196 543 aa16.69■□□□□ 0.26
AVL9-202ENST00000409301 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
AVL9-202ENST00000409301 MTUS2Q5JR59 1369 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms