RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
PKP1-201ENST00000263946 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
PKP1-201ENST00000263946 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
PKP1-201ENST00000263946 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
PKP1-201ENST00000263946 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
PKP1-201ENST00000263946 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
PKP1-201ENST00000263946 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
PKP1-201ENST00000263946 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
PKP1-201ENST00000263946 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
PKP1-201ENST00000263946 APLP2Q06481 763 aa17.92■□□□□ 0.46
PKP1-201ENST00000263946 TTBK1Q5TCY1 1321 aaPredicted RBP17.83■□□□□ 0.45
PKP1-201ENST00000263946 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
PKP1-201ENST00000263946 ABCC9O60706 1549 aa17.77■□□□□ 0.44
PKP1-201ENST00000263946 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
PKP1-201ENST00000263946 UBTFP17480 764 aaKnown RBP17.7■□□□□ 0.42
PKP1-201ENST00000263946 CCER1Q8TC90 406 aaPredicted RBP17.65■□□□□ 0.42
PKP1-201ENST00000263946 ERICH6Q7L0X2 663 aa17.63■□□□□ 0.41
PKP1-201ENST00000263946 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
PKP1-201ENST00000263946 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
PKP1-201ENST00000263946 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
PKP1-201ENST00000263946 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
PKP1-201ENST00000263946 MYT1Q01538 1121 aa17.47■□□□□ 0.39
PKP1-201ENST00000263946 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
PKP1-201ENST00000263946 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
PKP1-201ENST00000263946 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
PKP1-201ENST00000263946 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
PKP1-201ENST00000263946 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
PKP1-201ENST00000263946 HRCP23327 699 aa17.21■□□□□ 0.35
PKP1-201ENST00000263946 SCRIBQ14160 1630 aa17.15■□□□□ 0.34
PKP1-201ENST00000263946 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
PKP1-201ENST00000263946 ITGAEP38570 1179 aa17■□□□□ 0.31
PKP1-201ENST00000263946 NEFLP07196 543 aa17■□□□□ 0.31
PKP1-201ENST00000263946 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
PKP1-201ENST00000263946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
PKP1-201ENST00000263946 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
PKP1-201ENST00000263946 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
PKP1-201ENST00000263946 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.27
PKP1-201ENST00000263946 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
PKP1-201ENST00000263946 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
PKP1-201ENST00000263946 NACADO15069 1562 aa16.74■□□□□ 0.27
PKP1-201ENST00000263946 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
PKP1-201ENST00000263946 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
PKP1-201ENST00000263946 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
PKP1-201ENST00000263946 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
PKP1-201ENST00000263946 DIEXFQ68CQ4 756 aaKnown RBP16.55■□□□□ 0.24
PKP1-201ENST00000263946 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.24
PKP1-201ENST00000263946 FBLN2P98095 1184 aa16.51■□□□□ 0.23
PKP1-201ENST00000263946 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
PKP1-201ENST00000263946 NEUROD1Q13562 356 aa16.44■□□□□ 0.22
PKP1-201ENST00000263946 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
PKP1-201ENST00000263946 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
PKP1-201ENST00000263946 ARID3CA6NKF2 412 aa16.39■□□□□ 0.21
PKP1-201ENST00000263946 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
PKP1-201ENST00000263946 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
PKP1-201ENST00000263946 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
PKP1-201ENST00000263946 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
PKP1-201ENST00000263946 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.2
PKP1-201ENST00000263946 EEA1Q15075 1411 aa16.32■□□□□ 0.2
PKP1-201ENST00000263946 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
PKP1-201ENST00000263946 CLIP1P30622 1438 aa16.29■□□□□ 0.2
PKP1-201ENST00000263946 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
PKP1-201ENST00000263946 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
PKP1-201ENST00000263946 CDK11AQ9UQ88 783 aaPredicted RBP16.21■□□□□ 0.19
PKP1-201ENST00000263946 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
PKP1-201ENST00000263946 ZNF777Q9ULD5 760 aaPredicted RBP16.17■□□□□ 0.18
PKP1-201ENST00000263946 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
PKP1-201ENST00000263946 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
PKP1-201ENST00000263946 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
PKP1-201ENST00000263946 SOGA1O94964 1423 aa16.13■□□□□ 0.17
PKP1-201ENST00000263946 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
PKP1-201ENST00000263946 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
PKP1-201ENST00000263946 ANP32CO43423 234 aa16.09■□□□□ 0.17
PKP1-201ENST00000263946 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
PKP1-201ENST00000263946 WIZO95785 1651 aa16.06■□□□□ 0.16
PKP1-201ENST00000263946 GTF3C3Q9Y5Q9 886 aa16.05■□□□□ 0.16
PKP1-201ENST00000263946 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
PKP1-201ENST00000263946 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
PKP1-201ENST00000263946 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
PKP1-201ENST00000263946 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
PKP1-201ENST00000263946 TONSLQ96HA7 1378 aa16■□□□□ 0.15
PKP1-201ENST00000263946 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
PKP1-201ENST00000263946 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
PKP1-201ENST00000263946 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
PKP1-201ENST00000263946 CUX2O14529 1486 aa15.93■□□□□ 0.14
PKP1-201ENST00000263946 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
PKP1-201ENST00000263946 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
PKP1-201ENST00000263946 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
PKP1-201ENST00000263946 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
PKP1-201ENST00000263946 BCANQ96GW7 911 aa15.88■□□□□ 0.13
PKP1-201ENST00000263946 TSPY4P0CV99 314 aa15.87■□□□□ 0.13
PKP1-201ENST00000263946 TSPY10P0CW01 314 aa15.87■□□□□ 0.13
PKP1-201ENST00000263946 RRP7BPQ9NSQ0 103 aa15.87■□□□□ 0.13
PKP1-201ENST00000263946 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
PKP1-201ENST00000263946 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
PKP1-201ENST00000263946 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
PKP1-201ENST00000263946 PLEKHD1A6NEE1 506 aa15.8■□□□□ 0.12
PKP1-201ENST00000263946 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
PKP1-201ENST00000263946 MIER1Q8N108 512 aa15.79■□□□□ 0.12
PKP1-201ENST00000263946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.12
PKP1-201ENST00000263946 HIRIP3Q9BW71 556 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms