RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
AMBRA1-201ENST00000314845 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
AMBRA1-201ENST00000314845 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
AMBRA1-201ENST00000314845 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
AMBRA1-201ENST00000314845 EHMT2Q96KQ7 1210 aa19.01■□□□□ 0.63
AMBRA1-201ENST00000314845 APLP2Q06481 763 aa18.93■□□□□ 0.62
AMBRA1-201ENST00000314845 FAM9AQ8IZU1 332 aaPredicted RBP18.77■□□□□ 0.6
AMBRA1-201ENST00000314845 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
AMBRA1-201ENST00000314845 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
AMBRA1-201ENST00000314845 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
AMBRA1-201ENST00000314845 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
AMBRA1-201ENST00000314845 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
AMBRA1-201ENST00000314845 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
AMBRA1-201ENST00000314845 UBTFP17480 764 aaKnown RBP18.21■□□□□ 0.5
AMBRA1-201ENST00000314845 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
AMBRA1-201ENST00000314845 CCER1Q8TC90 406 aaPredicted RBP18.08■□□□□ 0.49
AMBRA1-201ENST00000314845 CENPBP07199 599 aaPredicted RBP17.97■□□□□ 0.47
AMBRA1-201ENST00000314845 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
AMBRA1-201ENST00000314845 MYT1Q01538 1121 aa17.67■□□□□ 0.42
AMBRA1-201ENST00000314845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
AMBRA1-201ENST00000314845 NEFLP07196 543 aa17.66■□□□□ 0.42
AMBRA1-201ENST00000314845 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
AMBRA1-201ENST00000314845 PPARGC1BQ86YN6 1023 aaKnown RBP17.66■□□□□ 0.42
AMBRA1-201ENST00000314845 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
AMBRA1-201ENST00000314845 MYT1LQ9UL68 1186 aa17.61■□□□□ 0.41
AMBRA1-201ENST00000314845 ITGAEP38570 1179 aa17.54■□□□□ 0.4
AMBRA1-201ENST00000314845 CHIC1Q5VXU3 224 aa17.52■□□□□ 0.4
AMBRA1-201ENST00000314845 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
AMBRA1-201ENST00000314845 LOC105371045A0A1W2PR82 267 aa17.43■□□□□ 0.38
AMBRA1-201ENST00000314845 ABCC9O60706 1549 aa17.42■□□□□ 0.38
AMBRA1-201ENST00000314845 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
AMBRA1-201ENST00000314845 POLR3GLQ9BT43 218 aa17.36■□□□□ 0.37
AMBRA1-201ENST00000314845 HRCP23327 699 aa17.28■□□□□ 0.36
AMBRA1-201ENST00000314845 FAM50AQ14320 339 aaKnown RBP17.15■□□□□ 0.34
AMBRA1-201ENST00000314845 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
AMBRA1-201ENST00000314845 CNGB1Q14028 1251 aaPredicted RBP17.11■□□□□ 0.33
AMBRA1-201ENST00000314845 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
AMBRA1-201ENST00000314845 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
AMBRA1-201ENST00000314845 FBLN2P98095 1184 aa17.02■□□□□ 0.31
AMBRA1-201ENST00000314845 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
AMBRA1-201ENST00000314845 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
AMBRA1-201ENST00000314845 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
AMBRA1-201ENST00000314845 CLSPNQ9HAW4 1339 aa16.82■□□□□ 0.28
AMBRA1-201ENST00000314845 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
AMBRA1-201ENST00000314845 CDK11AQ9UQ88 783 aaPredicted RBP16.78■□□□□ 0.28
AMBRA1-201ENST00000314845 P3H3Q8IVL6 736 aa16.77■□□□□ 0.28
AMBRA1-201ENST00000314845 ANP32CO43423 234 aa16.75■□□□□ 0.27
AMBRA1-201ENST00000314845 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
AMBRA1-201ENST00000314845 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
AMBRA1-201ENST00000314845 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
AMBRA1-201ENST00000314845 ZNF777Q9ULD5 760 aaPredicted RBP16.66■□□□□ 0.26
AMBRA1-201ENST00000314845 BCANQ96GW7 911 aa16.63■□□□□ 0.25
AMBRA1-201ENST00000314845 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
AMBRA1-201ENST00000314845 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
AMBRA1-201ENST00000314845 NEFMP07197 916 aa16.61■□□□□ 0.25
AMBRA1-201ENST00000314845 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
AMBRA1-201ENST00000314845 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
AMBRA1-201ENST00000314845 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
AMBRA1-201ENST00000314845 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
AMBRA1-201ENST00000314845 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
AMBRA1-201ENST00000314845 STAG3Q9UJ98 1225 aa16.44■□□□□ 0.22
AMBRA1-201ENST00000314845 TONSLQ96HA7 1378 aa16.44■□□□□ 0.22
AMBRA1-201ENST00000314845 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
AMBRA1-201ENST00000314845 GTF3C3Q9Y5Q9 886 aa16.4■□□□□ 0.22
AMBRA1-201ENST00000314845 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
AMBRA1-201ENST00000314845 TSPY4P0CV99 314 aa16.36■□□□□ 0.21
AMBRA1-201ENST00000314845 TSPY10P0CW01 314 aa16.36■□□□□ 0.21
AMBRA1-201ENST00000314845 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
AMBRA1-201ENST00000314845 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
AMBRA1-201ENST00000314845 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
AMBRA1-201ENST00000314845 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
AMBRA1-201ENST00000314845 RB1CC1Q8TDY2 1594 aa16.28■□□□□ 0.2
AMBRA1-201ENST00000314845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.22e-7■■□□□ 11.4
AMBRA1-201ENST00000314845 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
AMBRA1-201ENST00000314845 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
AMBRA1-201ENST00000314845 CLIP1P30622 1438 aa16.21■□□□□ 0.19
AMBRA1-201ENST00000314845 ACIN1Q9UKV3 1341 aaKnown RBP16.2■□□□□ 0.18
AMBRA1-201ENST00000314845 DDX10Q13206 875 aaKnown RBP16.2■□□□□ 0.18
AMBRA1-201ENST00000314845 EEA1Q15075 1411 aa16.19■□□□□ 0.18
AMBRA1-201ENST00000314845 ANP32AP39687 249 aaKnown RBP16.19■□□□□ 0.18
AMBRA1-201ENST00000314845 HNRNPUQ00839 825 aaKnown RBP eCLIP16.18■□□□□ 0.18
AMBRA1-201ENST00000314845 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
AMBRA1-201ENST00000314845 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
AMBRA1-201ENST00000314845 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
AMBRA1-201ENST00000314845 RSF1Q96T23 1441 aaPredicted RBP16.14■□□□□ 0.17
AMBRA1-201ENST00000314845 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
AMBRA1-201ENST00000314845 NACADO15069 1562 aa16.11■□□□□ 0.17
AMBRA1-201ENST00000314845 WDR43Q15061 677 aaKnown RBP eCLIP16.09■□□□□ 0.17
AMBRA1-201ENST00000314845 KCNH8Q96L42 1107 aa16.09■□□□□ 0.17
AMBRA1-201ENST00000314845 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.17
AMBRA1-201ENST00000314845 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
AMBRA1-201ENST00000314845 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
AMBRA1-201ENST00000314845 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
AMBRA1-201ENST00000314845 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
AMBRA1-201ENST00000314845 FKBP8Q14318 412 aa16.07■□□□□ 0.16
AMBRA1-201ENST00000314845 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
AMBRA1-201ENST00000314845 SALL2Q9Y467 1007 aaPredicted RBP16.06■□□□□ 0.16
AMBRA1-201ENST00000314845 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
AMBRA1-201ENST00000314845 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.166e-7■■■□□ 18.8
AMBRA1-201ENST00000314845 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms