Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 VENTXP4-201ENST00000449029 958 ntBASIC13.39□□□□□ -0.27
CFHR1Q03591 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 KRT18P37-201ENST00000520711 1282 ntBASIC13.39□□□□□ -0.27
CFHR1Q03591 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.39□□□□□ -0.27
CFHR1Q03591 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.39□□□□□ -0.27
CFHR1Q03591 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 AL353622.2-201ENST00000605846 425 ntBASIC13.39□□□□□ -0.27
CFHR1Q03591 AC010976.2-201ENST00000609697 852 ntBASIC13.39□□□□□ -0.27
CFHR1Q03591 BAP1-211ENST00000615113 489 ntBASIC13.39□□□□□ -0.27
CFHR1Q03591 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CFHR1Q03591 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.39□□□□□ -0.27
CFHR1Q03591 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.39□□□□□ -0.27
CFHR1Q03591 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.39□□□□□ -0.27
CFHR1Q03591 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CFHR1Q03591 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CFHR1Q03591 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.39□□□□□ -0.27
CFHR1Q03591 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.38□□□□□ -0.27
CFHR1Q03591 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CFHR1Q03591 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC13.38□□□□□ -0.27
CFHR1Q03591 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.38□□□□□ -0.27
CFHR1Q03591 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.38□□□□□ -0.27
CFHR1Q03591 KRT18P62-201ENST00000446618 1287 ntBASIC13.38□□□□□ -0.27
CFHR1Q03591 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.38□□□□□ -0.27
CFHR1Q03591 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.38□□□□□ -0.27
CFHR1Q03591 BCL2L12P1-201ENST00000508390 733 ntBASIC13.38□□□□□ -0.27
CFHR1Q03591 AC093300.1-201ENST00000510368 1201 ntBASIC13.38□□□□□ -0.27
CFHR1Q03591 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.38□□□□□ -0.27
CFHR1Q03591 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.38□□□□□ -0.27
CFHR1Q03591 AC018846.1-201ENST00000568231 183 ntBASIC13.38□□□□□ -0.27
CFHR1Q03591 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CFHR1Q03591 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC13.38□□□□□ -0.27
CFHR1Q03591 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.38□□□□□ -0.27
CFHR1Q03591 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
CFHR1Q03591 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.38□□□□□ -0.27
CFHR1Q03591 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 PES1P2-201ENST00000449745 1735 ntBASIC13.38□□□□□ -0.27
CFHR1Q03591 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CFHR1Q03591 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CFHR1Q03591 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CFHR1Q03591 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.38□□□□□ -0.27
CFHR1Q03591 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.37□□□□□ -0.27
CFHR1Q03591 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CFHR1Q03591 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CFHR1Q03591 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.37□□□□□ -0.27
CFHR1Q03591 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.37□□□□□ -0.27
CFHR1Q03591 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms