Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
TRGV3P03979 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV3P03979 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV3P03979 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 OR2R1P-201ENST00000441404 914 ntBASIC11.25□□□□□ -0.61
TRGV3P03979 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV3P03979 KRT8P13-201ENST00000463294 1010 ntBASIC11.25□□□□□ -0.61
TRGV3P03979 MARK2P5-201ENST00000507649 634 ntBASIC11.25□□□□□ -0.61
TRGV3P03979 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV3P03979 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV3P03979 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 MIR4525-201ENST00000580000 75 ntBASIC11.25□□□□□ -0.61
TRGV3P03979 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC11.25□□□□□ -0.61
TRGV3P03979 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.25□□□□□ -0.61
TRGV3P03979 NAP1L6-202ENST00000641404 1222 ntBASIC11.25□□□□□ -0.61
TRGV3P03979 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 BEND3P1-201ENST00000421591 1944 ntBASIC11.25□□□□□ -0.61
TRGV3P03979 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TRGV3P03979 RN7SKP214-201ENST00000364208 315 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 CRCP-204ENST00000398684 492 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 MIR1247-201ENST00000408206 136 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 AC125604.1-201ENST00000496255 707 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 SCARNA20.5-201ENST00000516991 142 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC11.24□□□□□ -0.61
TRGV3P03979 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.24□□□□□ -0.61
TRGV3P03979 AC091544.8-201ENST00000619490 361 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 AL805961.1-203ENST00000641078 1258 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRGV3P03979 AC016397.2-201ENST00000624848 1985 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 AL022313.4-201ENST00000562756 2046 ntBASIC11.24□□□□□ -0.61
TRGV3P03979 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.24□□□□□ -0.61
TRGV3P03979 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms