Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 INTS4P1-203ENST00000641008 3683 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 KRT8P38-201ENST00000441370 1430 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AC005722.1-201ENST00000431878 964 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 AC026336.4-201ENST00000624565 1050 ntBASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCDC168Q8NDH2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CCND3P1-201ENST00000438347 580 ntBASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 AC023051.2-201ENST00000541141 460 ntBASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 BX322562.1-201ENST00000617004 561 ntBASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 AC138627.1-201ENST00000641127 1257 ntBASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 AC015688.4-201ENST00000580780 1647 ntBASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 LINP1-201ENST00000417112 917 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 CDKN2A-AS1-201ENST00000441769 823 ntBASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCDC168Q8NDH2 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms