RNA–Protein interactions for RNA: ENST00000441665.1

AP002856.3-201, humanhuman

TSL 3 BASIC

Gene AP002856.3, Length 635 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.3-201ENST00000441665 AEBP2Q6ZN18 517 aaPredicted RBP38.22■■■■□ 3.71
AP002856.3-201ENST00000441665 CHIC1Q5VXU3 224 aa35.71■■■■□ 3.31
AP002856.3-201ENST00000441665 SENP3Q9H4L4 574 aaPredicted RBP32.6■■■□□ 2.81
AP002856.3-201ENST00000441665 PHF23Q9BUL5 403 aaPredicted RBP32.11■■■□□ 2.73
AP002856.3-201ENST00000441665 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
AP002856.3-201ENST00000441665 FOXD1Q16676 465 aa30.51■■■□□ 2.47
AP002856.3-201ENST00000441665 POTEDQ86YR6 584 aa29■■■□□ 2.23
AP002856.3-201ENST00000441665 MSH5O43196 834 aa28.69■■■□□ 2.18
AP002856.3-201ENST00000441665 PIAS4Q8N2W9 510 aaPredicted RBP28.33■■■□□ 2.13
AP002856.3-201ENST00000441665 PLPPR3Q6T4P5 718 aa28.24■■■□□ 2.11
AP002856.3-201ENST00000441665 PPP6R1Q9UPN7 881 aa28.12■■■□□ 2.09
AP002856.3-201ENST00000441665 ABCC9O60706 1549 aa28.02■■■□□ 2.08
AP002856.3-201ENST00000441665 ADRA2BP18089 450 aa27.96■■■□□ 2.07
AP002856.3-201ENST00000441665 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
AP002856.3-201ENST00000441665 DNAJC5BQ9UF47 199 aa26.62■■□□□ 1.85
AP002856.3-201ENST00000441665 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
AP002856.3-201ENST00000441665 NACADO15069 1562 aa26.2■■□□□ 1.79
AP002856.3-201ENST00000441665 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
AP002856.3-201ENST00000441665 UNC13AQ9UPW8 1703 aa25.96■■□□□ 1.75
AP002856.3-201ENST00000441665 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
AP002856.3-201ENST00000441665 MAPK8IP2Q13387 824 aaPredicted RBP25.86■■□□□ 1.73
AP002856.3-201ENST00000441665 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
AP002856.3-201ENST00000441665 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
AP002856.3-201ENST00000441665 MYO15BQ96JP2 1530 aa25.69■■□□□ 1.7
AP002856.3-201ENST00000441665 SCAF1Q9H7N4 1312 aaKnown RBP25.49■■□□□ 1.67
AP002856.3-201ENST00000441665 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
AP002856.3-201ENST00000441665 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
AP002856.3-201ENST00000441665 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
AP002856.3-201ENST00000441665 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
AP002856.3-201ENST00000441665 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
AP002856.3-201ENST00000441665 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
AP002856.3-201ENST00000441665 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
AP002856.3-201ENST00000441665 CACNB1Q02641 598 aaPredicted RBP24.94■■□□□ 1.58
AP002856.3-201ENST00000441665 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
AP002856.3-201ENST00000441665 PPP4R3CPQ6ZMV5 832 aa24.7■■□□□ 1.54
AP002856.3-201ENST00000441665 DCAF8L1A6NGE4 600 aa24.69■■□□□ 1.54
AP002856.3-201ENST00000441665 HOXD11P31277 338 aaPredicted RBP24.64■■□□□ 1.54
AP002856.3-201ENST00000441665 RNF39Q9H2S5 420 aa24.49■■□□□ 1.51
AP002856.3-201ENST00000441665 CNKSR2Q8WXI2 1034 aa24.35■■□□□ 1.49
AP002856.3-201ENST00000441665 CUX2O14529 1486 aa24.34■■□□□ 1.49
AP002856.3-201ENST00000441665 RNF216Q9NWF9 866 aaPredicted RBP24.28■■□□□ 1.48
AP002856.3-201ENST00000441665 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
AP002856.3-201ENST00000441665 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
AP002856.3-201ENST00000441665 C1QBPQ07021 282 aaKnown RBP24.05■■□□□ 1.44
AP002856.3-201ENST00000441665 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
AP002856.3-201ENST00000441665 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
AP002856.3-201ENST00000441665 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
AP002856.3-201ENST00000441665 NESP48681 1621 aa23.95■■□□□ 1.42
AP002856.3-201ENST00000441665 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
AP002856.3-201ENST00000441665 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
AP002856.3-201ENST00000441665 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
AP002856.3-201ENST00000441665 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
AP002856.3-201ENST00000441665 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
AP002856.3-201ENST00000441665 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
AP002856.3-201ENST00000441665 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
AP002856.3-201ENST00000441665 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
AP002856.3-201ENST00000441665 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
AP002856.3-201ENST00000441665 NCBP3Q53F19 620 aaKnown RBP23.51■■□□□ 1.35
AP002856.3-201ENST00000441665 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
AP002856.3-201ENST00000441665 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
AP002856.3-201ENST00000441665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.4■■□□□ 1.34
AP002856.3-201ENST00000441665 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
AP002856.3-201ENST00000441665 WDR62O43379 1518 aa23.39■■□□□ 1.34
AP002856.3-201ENST00000441665 NPM3O75607 178 aaKnown RBP23.27■■□□□ 1.32
AP002856.3-201ENST00000441665 WIZO95785 1651 aa23.25■■□□□ 1.31
AP002856.3-201ENST00000441665 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
AP002856.3-201ENST00000441665 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
AP002856.3-201ENST00000441665 OSCARQ8IYS5 282 aa23.09■■□□□ 1.29
AP002856.3-201ENST00000441665 CFTRP13569 1480 aa23.06■■□□□ 1.28
AP002856.3-201ENST00000441665 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
AP002856.3-201ENST00000441665 U3KPZ7 1027 aaPredicted RBP22.93■■□□□ 1.26
AP002856.3-201ENST00000441665 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
AP002856.3-201ENST00000441665 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
AP002856.3-201ENST00000441665 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
AP002856.3-201ENST00000441665 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
AP002856.3-201ENST00000441665 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
AP002856.3-201ENST00000441665 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
AP002856.3-201ENST00000441665 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
AP002856.3-201ENST00000441665 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
AP002856.3-201ENST00000441665 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
AP002856.3-201ENST00000441665 SPINK5Q9NQ38 1064 aaPredicted RBP22.76■■□□□ 1.23
AP002856.3-201ENST00000441665 DSG3P32926 999 aa22.74■■□□□ 1.23
AP002856.3-201ENST00000441665 EIF4G3O43432 1585 aaKnown RBP22.69■■□□□ 1.22
AP002856.3-201ENST00000441665 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
AP002856.3-201ENST00000441665 CAPN15O75808 1086 aa22.68■■□□□ 1.22
AP002856.3-201ENST00000441665 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
AP002856.3-201ENST00000441665 CHD1O14646 1710 aa22.62■■□□□ 1.21
AP002856.3-201ENST00000441665 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
AP002856.3-201ENST00000441665 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
AP002856.3-201ENST00000441665 POTEHQ6S545 545 aa22.59■■□□□ 1.21
AP002856.3-201ENST00000441665 DNMBPQ6XZF7 1577 aa22.58■■□□□ 1.2
AP002856.3-201ENST00000441665 TARBP1Q13395 1621 aaKnown RBP22.54■■□□□ 1.2
AP002856.3-201ENST00000441665 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
AP002856.3-201ENST00000441665 AQRO60306 1485 aaKnown RBP eCLIP22.51■■□□□ 1.19
AP002856.3-201ENST00000441665 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
AP002856.3-201ENST00000441665 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
AP002856.3-201ENST00000441665 FBLN2P98095 1184 aa22.42■■□□□ 1.18
AP002856.3-201ENST00000441665 SLC4A2P04920 1241 aa22.4■■□□□ 1.18
AP002856.3-201ENST00000441665 KCNA4P22459 653 aa22.35■■□□□ 1.17
AP002856.3-201ENST00000441665 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms