Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF135Q8IUD6 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 GUSBP10-201ENST00000417412 665 ntBASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AL035414.1-201ENST00000451327 857 ntBASIC15.14■□□□□ 0.01
RNF135Q8IUD6 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AC006548.2-201ENST00000605217 529 ntBASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AC012073.1-201ENST00000606114 1108 ntBASIC15.14■□□□□ 0.01
RNF135Q8IUD6 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.14■□□□□ 0.01
RNF135Q8IUD6 AC004554.1-201ENST00000422830 1468 ntBASIC15.14■□□□□ 0.01
RNF135Q8IUD6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
RNF135Q8IUD6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 AC010740.1-201ENST00000417035 684 ntBASIC15.13■□□□□ 0.01
RNF135Q8IUD6 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 RPL35P9-201ENST00000446059 350 ntBASIC15.13■□□□□ 0.01
RNF135Q8IUD6 AL135901.1-201ENST00000451812 333 ntBASIC15.13■□□□□ 0.01
RNF135Q8IUD6 DUX4L50-201ENST00000455245 715 ntBASIC15.13■□□□□ 0.01
RNF135Q8IUD6 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF135Q8IUD6 AC021305.1-201ENST00000520656 1514 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms