Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 AL354702.1-201ENST00000442006 1960 ntBASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.07■□□□□ 0.16
NFRKBQ6P4R8 SBF1P1-201ENST00000444527 5631 ntBASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AP000911.2-201ENST00000534330 502 ntBASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AC027237.1-201ENST00000560942 655 ntBASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AC107464.3-201ENST00000609172 737 ntBASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AL591471.1-201ENST00000621855 229 ntBASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 AC073911.3-201ENST00000624401 631 ntBASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.06■□□□□ 0.16
NFRKBQ6P4R8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 AP002353.1-201ENST00000528257 1599 ntBASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 LINC01815-202ENST00000641468 1409 ntBASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 AL137784.3-201ENST00000623858 2288 ntBASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 AL354861.1-201ENST00000445213 355 ntBASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 RN7SL470P-201ENST00000583069 259 ntBASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NFRKBQ6P4R8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFRKBQ6P4R8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NFRKBQ6P4R8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFRKBQ6P4R8 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NFRKBQ6P4R8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.04■□□□□ 0.16
NFRKBQ6P4R8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.04■□□□□ 0.16
NFRKBQ6P4R8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms