Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AC073210.1-201ENST00000414799 232 ntBASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 HNRNPA1P59-201ENST00000430583 918 ntBASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AC069421.1-201ENST00000447462 323 ntBASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RSPO4Q2I0M5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 FLJ16779-201ENST00000612722 7638 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 AC092135.3-201ENST00000624151 1846 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 HNRNPABP1-201ENST00000406003 734 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 TPT1P9-201ENST00000413759 514 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 RN7SL87P-201ENST00000497657 288 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 KRT8P34-201ENST00000577607 1044 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 PRR20FP-201ENST00000603320 180 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 AC139712.1-201ENST00000378256 1875 ntBASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.63□□□□□ -0.23
RSPO4Q2I0M5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 AC007686.3-201ENST00000619017 3487 ntBASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RSPO4Q2I0M5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms