Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 AC099521.3-201ENST00000624251 2938 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 FAM90A7P-201ENST00000382628 1395 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 FAM90A23P-201ENST00000400136 1395 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 KRT8P29-201ENST00000420409 1371 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 PEG13-201ENST00000631594 5667 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC1A1P43005 AC079776.1-201ENST00000401540 1152 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 SNORA50C-201ENST00000408535 133 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 MIR1909-201ENST00000411312 80 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 AC099336.1-201ENST00000417053 1171 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 AC136604.1-202ENST00000425471 771 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC1A1P43005 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
SLC1A1P43005 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC1A1P43005 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC1A1P43005 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 SNORA50.1-201ENST00000628590 135 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 LINC01815-202ENST00000641468 1409 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A1P43005 AC027612.1-201ENST00000445234 2395 ntBASIC14.89□□□□□ -0.03
SLC1A1P43005 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A1P43005 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC1A1P43005 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SLC1A1P43005 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SLC1A1P43005 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SLC1A1P43005 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC1A1P43005 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC1A1P43005 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 AL035633.1-201ENST00000406139 838 ntBASIC14.88□□□□□ -0.03
SLC1A1P43005 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC1A1P43005 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC1A1P43005 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms