Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SALL4P6-201ENST00000429385 1691 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 IL9RP2-201ENST00000423948 1312 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 FO681548.1-201ENST00000455617 1132 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 INE1-201ENST00000456273 945 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 HLA-V-204ENST00000476601 1289 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 MEIS3P1-201ENST00000495167 958 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC044860.1-202ENST00000559481 777 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC004466.1-201ENST00000599515 1080 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AL391069.4-201ENST00000609583 481 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC092028.1-202ENST00000641483 3547 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC092028.1-201ENST00000641781 3540 ntBASIC10.67□□□□□ -0.7
NUP35Q8NFH5 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC10.67□□□□□ -0.7
NUP35Q8NFH5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
NUP35Q8NFH5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms