Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.34□□□□□ -0.27
PSMD4P55036 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.34□□□□□ -0.27
PSMD4P55036 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.34□□□□□ -0.27
PSMD4P55036 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.34□□□□□ -0.27
PSMD4P55036 AL033527.4-201ENST00000641026 673 ntBASIC13.34□□□□□ -0.27
PSMD4P55036 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
PSMD4P55036 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.34□□□□□ -0.27
PSMD4P55036 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.34□□□□□ -0.27
PSMD4P55036 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PSMD4P55036 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
PSMD4P55036 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PSMD4P55036 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
PSMD4P55036 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PSMD4P55036 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PSMD4P55036 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
PSMD4P55036 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.33□□□□□ -0.28
PSMD4P55036 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PSMD4P55036 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
PSMD4P55036 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PSMD4P55036 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
PSMD4P55036 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.33□□□□□ -0.28
PSMD4P55036 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 AC004898.1-201ENST00000451057 766 ntBASIC13.33□□□□□ -0.28
PSMD4P55036 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 HLA-J-204ENST00000495278 958 ntBASIC13.33□□□□□ -0.28
PSMD4P55036 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.33□□□□□ -0.28
PSMD4P55036 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.33□□□□□ -0.28
PSMD4P55036 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.33□□□□□ -0.28
PSMD4P55036 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.33□□□□□ -0.28
PSMD4P55036 AC090164.2-201ENST00000611487 516 ntBASIC13.33□□□□□ -0.28
PSMD4P55036 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.33□□□□□ -0.28
PSMD4P55036 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PSMD4P55036 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.33□□□□□ -0.28
PSMD4P55036 AL022313.4-201ENST00000562756 2046 ntBASIC13.33□□□□□ -0.28
PSMD4P55036 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PSMD4P55036 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.33□□□□□ -0.28
PSMD4P55036 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PSMD4P55036 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.32□□□□□ -0.28
PSMD4P55036 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PSMD4P55036 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms