Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AC138649.2-201ENST00000615886 705 ntBASIC14.4□□□□□ -0.1
HLA-DPA1P20036 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.4□□□□□ -0.11
HLA-DPA1P20036 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 AC023794.5-201ENST00000564380 2157 ntBASIC14.39□□□□□ -0.11
HLA-DPA1P20036 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 AC011742.3-201ENST00000439053 820 ntBASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 AL451050.2-201ENST00000606967 682 ntBASIC14.39□□□□□ -0.11
HLA-DPA1P20036 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 LINC00115-201ENST00000473798 1317 ntBASIC14.39□□□□□ -0.11
HLA-DPA1P20036 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DPA1P20036 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 KRT8P21-201ENST00000430398 1491 ntBASIC14.38□□□□□ -0.11
HLA-DPA1P20036 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 RN7SKP214-201ENST00000364208 315 ntBASIC14.38□□□□□ -0.11
HLA-DPA1P20036 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms