Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A2P16615 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
ATP2A2P16615 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A2P16615 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A2P16615 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A2P16615 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.82■□□□□ 0.12
ATP2A2P16615 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A2P16615 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATP2A2P16615 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
ATP2A2P16615 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ATP2A2P16615 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ATP2A2P16615 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP2A2P16615 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP2A2P16615 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP2A2P16615 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP2A2P16615 GCSHP3-201ENST00000431120 391 ntBASIC15.81■□□□□ 0.12
ATP2A2P16615 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP2A2P16615 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP2A2P16615 DPY19L2P5-201ENST00000456300 331 ntBASIC15.81■□□□□ 0.12
ATP2A2P16615 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP2A2P16615 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP2A2P16615 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP2A2P16615 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.81■□□□□ 0.12
ATP2A2P16615 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP2A2P16615 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.81■□□□□ 0.12
ATP2A2P16615 AP003392.6-201ENST00000607709 325 ntBASIC15.81■□□□□ 0.12
ATP2A2P16615 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.81■□□□□ 0.12
ATP2A2P16615 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.81■□□□□ 0.12
ATP2A2P16615 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATP2A2P16615 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ATP2A2P16615 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ATP2A2P16615 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP2A2P16615 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP2A2P16615 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.8■□□□□ 0.12
ATP2A2P16615 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 HERC2P11-201ENST00000562845 725 ntBASIC15.8■□□□□ 0.12
ATP2A2P16615 AC100756.2-201ENST00000569537 736 ntBASIC15.8■□□□□ 0.12
ATP2A2P16615 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ATP2A2P16615 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.8■□□□□ 0.12
ATP2A2P16615 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 AC023090.2-201ENST00000625182 2110 ntBASIC15.8■□□□□ 0.12
ATP2A2P16615 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ATP2A2P16615 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ATP2A2P16615 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.8■□□□□ 0.12
ATP2A2P16615 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms