Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC14.35□□□□□ -0.11
XIRP2A4UGR9 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.35□□□□□ -0.11
XIRP2A4UGR9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XIRP2A4UGR9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.35□□□□□ -0.11
XIRP2A4UGR9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
XIRP2A4UGR9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
XIRP2A4UGR9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XIRP2A4UGR9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 ASLP1-201ENST00000428790 637 ntBASIC14.34□□□□□ -0.11
XIRP2A4UGR9 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 OR52X1P-201ENST00000446117 914 ntBASIC14.34□□□□□ -0.11
XIRP2A4UGR9 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 KRT18P42-201ENST00000505048 1255 ntBASIC14.34□□□□□ -0.11
XIRP2A4UGR9 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 RN7SL76P-201ENST00000482435 289 ntBASIC14.34□□□□□ -0.11
XIRP2A4UGR9 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.34□□□□□ -0.11
XIRP2A4UGR9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
XIRP2A4UGR9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
XIRP2A4UGR9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
XIRP2A4UGR9 HSPA8P5-201ENST00000456928 2069 ntBASIC14.33□□□□□ -0.11
XIRP2A4UGR9 AC069061.4-201ENST00000581294 1347 ntBASIC14.33□□□□□ -0.11
XIRP2A4UGR9 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
XIRP2A4UGR9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
XIRP2A4UGR9 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
XIRP2A4UGR9 SRP9P1-201ENST00000445874 261 ntBASIC14.33□□□□□ -0.11
XIRP2A4UGR9 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.33□□□□□ -0.11
XIRP2A4UGR9 RN7SL2-201ENST00000490232 300 ntBASIC14.33□□□□□ -0.11
XIRP2A4UGR9 AC112250.1-201ENST00000504640 745 ntBASIC14.33□□□□□ -0.11
XIRP2A4UGR9 RN7SL4P-201ENST00000584058 295 ntBASIC14.33□□□□□ -0.11
XIRP2A4UGR9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 AC104115.1-201ENST00000484005 623 ntBASIC14.33□□□□□ -0.12
XIRP2A4UGR9 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 AC015656.1-201ENST00000624209 3578 ntBASIC14.33□□□□□ -0.12
XIRP2A4UGR9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XIRP2A4UGR9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms